| Sequence 1: | NP_001188867.1 | Gene: | l(2)k09848 / 35536 | FlyBaseID: | FBgn0284246 | Length: | 419 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_079921.2 | Gene: | Snrnp40 / 66585 | MGIID: | 1913835 | Length: | 358 | Species: | Mus musculus |
| Alignment Length: | 318 | Identity: | 74/318 - (23%) |
|---|---|---|---|
| Similarity: | 127/318 - (39%) | Gaps: | 83/318 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 100 PIVGLARYNDKLI---AGIGNGE----------IQSLELEANDESEPVVIATGDQMDHLRQCAQV 151
Fly 152 K---SIVATGGKER-------------QNNLK-----VYDL--NADGKQIFTSKNLPNDYLQLEV 193
Fly 194 PVWDSDIG-----------FVD-------GPSVLATCSRTGYVRIYDTRKQRRPVACFASEEHGM 240
Fly 241 SFTTLVAKGNFIYTGTTMGALKAFDTRRMKTHVHTYKGFTGGISDLHLDATGRFLSSASLDRYVR 305
Fly 306 IHD------SETTVLLYQCYVKSKATKILIRPFE-NEARVTEEPE--EVADLQMDRNV 354 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| l(2)k09848 | NP_001188867.1 | WD40 | 36..>327 | CDD:225201 | 65/286 (23%) |
| WD40 | 55..318 | CDD:295369 | 63/277 (23%) | ||
| WD40 repeat | 146..184 | CDD:293791 | 13/60 (22%) | ||
| WD40 repeat | 240..277 | CDD:293791 | 8/36 (22%) | ||
| WD40 repeat | 283..309 | CDD:293791 | 9/31 (29%) | ||
| Snrnp40 | NP_079921.2 | WD40 | 63..352 | CDD:238121 | 64/268 (24%) |
| WD 1 | 65..104 | 6/40 (15%) | |||
| WD40 repeat | 71..108 | CDD:293791 | 6/36 (17%) | ||
| WD 2 | 108..147 | 12/44 (27%) | |||
| WD40 repeat | 113..149 | CDD:293791 | 12/41 (29%) | ||
| WD 3 | 150..190 | 12/40 (30%) | |||
| WD40 repeat | 156..191 | CDD:293791 | 10/35 (29%) | ||
| WD 4 | 192..231 | 7/40 (18%) | |||
| WD40 repeat | 197..233 | CDD:293791 | 8/37 (22%) | ||
| WD 5 | 234..273 | 10/38 (26%) | |||
| WD40 repeat | 239..279 | CDD:293791 | 11/39 (28%) | ||
| WD 6 | 284..323 | 9/36 (25%) | |||
| WD40 repeat | 289..313 | CDD:293791 | 6/22 (27%) | ||
| WD 7 | 326..358 | ||||
| WD40 repeat | 331..353 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||