DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k09848 and wdr74

DIOPT Version :9

Sequence 1:NP_001188867.1 Gene:l(2)k09848 / 35536 FlyBaseID:FBgn0284246 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001070031.1 Gene:wdr74 / 558996 ZFINID:ZDB-GENE-060929-1138 Length:375 Species:Danio rerio


Alignment Length:392 Identity:110/392 - (28%)
Similarity:189/392 - (48%) Gaps:33/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LYVGTHTGSFKHLVPASEKTPYGQSNLSDLCALDKDSRVTSLAFGNDDQTEILLGRAKDAVEIHS 83
            :::|:.||..|. |...:|..:   |..::..|.:|..|..:|:|:..::|:|||.....|:..|
Zfish    10 IWLGSETGILKG-VSLRKKQAF---NFCEMSCLSRDQEVCVMAWGDPYESELLLGSVNGTVKTFS 70

  Fly    84 FTEKG---HSRNTVSFNAAPIVGLARYNDKLIAGIGNGEIQSLELEANDESEPVVIATGDQMDHL 145
             |:||   .::.....:.....|||..:..:|..:.:|   .|::.....::.|.:..|..:..:
Zfish    71 -TDKGIFTATKECGDPSQGKFTGLAVTDSSMITCVESG---LLKVWKEGSTDTVEVNVGKDICKM 131

  Fly   146 RQCAQVKSIVATGGKERQNNLKVYDLNADGKQIFTSKNLPNDYLQLEVPVWDSDIGFVDGPSVLA 210
            ||....:..|||||||  |.|||:||....|.|||:||:.:|:|::.||||..||.|:.....:.
Zfish   132 RQNQSQRHHVATGGKE--NPLKVWDLEKPDKPIFTAKNVAHDWLEMRVPVWVRDISFIADSDKIV 194

  Fly   211 TCSRTGYVRIYD-TRKQRRPVACFASEEHGMSFTTLVAKGNFIYTGTTMGALKAFDTRRMKTHVH 274
            ||:....||:|| :..|||||......|:.::..:|.|..:.:..|.|.|.|...|.|:.... .
Zfish   195 TCTGHHKVRVYDPSTPQRRPVLEADFGEYPLTALSLPASQDAVVVGNTHGELAILDLRKGLVR-G 258

  Fly   275 TYKGFTGGISDLHLDATGRFLSSASLDRYVRIHDSETTVLLYQCYVKSKATKILIRPFENEARVT 339
            .:||..|.:..|....:...::|..|||::|:|..|...|.::.|:||:...:|:     .:|..
Zfish   259 CFKGLAGAVRGLQCHPSLPLVASCGLDRFLRVHSLEDRSLQHKVYLKSRLNCVLL-----SSRDL 318

  Fly   340 EEPEEVADLQMDRNVSENKSVNATSVDNEYEDMFDQMPTVGDSDNESEEEMSNIKLSKADLKRRS 404
            |...:..|      |.|.|:       .|.::::|.|.||.:...:...|.....::.||.|::.
Zfish   319 ESSSDSGD------VEEVKA-------EEEDEVWDNMETVTEKTKKRAAEKDEAAVTGADGKKKR 370

  Fly   405 SE 406
            .:
Zfish   371 KQ 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k09848NP_001188867.1 WD40 36..>327 CDD:225201 89/294 (30%)
WD40 55..318 CDD:295369 82/266 (31%)
WD40 repeat 146..184 CDD:293791 20/37 (54%)
WD40 repeat 240..277 CDD:293791 8/36 (22%)
WD40 repeat 283..309 CDD:293791 7/25 (28%)
wdr74NP_001070031.1 WD40 repeat 44..82 CDD:293791 12/38 (32%)
WD40 <52..325 CDD:225201 85/284 (30%)
WD40 repeat 125..166 CDD:293791 20/42 (48%)
WD40 137..>300 CDD:295369 60/165 (36%)
WD40 repeat 182..219 CDD:293791 14/36 (39%)
WD40 repeat 225..261 CDD:293791 8/36 (22%)
WD40 repeat 267..309 CDD:293791 12/41 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589395
Domainoid 1 1.000 139 1.000 Domainoid score I4732
eggNOG 1 0.900 - - E1_KOG3881
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I4485
OMA 1 1.010 - - QHG56769
OrthoDB 1 1.010 - - D1439033at2759
OrthoFinder 1 1.000 - - FOG0004298
OrthoInspector 1 1.000 - - oto40608
orthoMCL 1 0.900 - - OOG6_103653
Panther 1 1.100 - - LDO PTHR16038
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R841
SonicParanoid 1 1.000 - - X3557
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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