DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k09848 and wdr74

DIOPT Version :10

Sequence 1:NP_610200.1 Gene:l(2)k09848 / 35536 FlyBaseID:FBgn0284246 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001005144.1 Gene:wdr74 / 448734 XenbaseID:XB-GENE-969801 Length:375 Species:Xenopus tropicalis


Alignment Length:420 Identity:118/420 - (28%)
Similarity:192/420 - (45%) Gaps:70/420 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AKHELYVGTHTGSFKHLVPASEKTPYGQSNLSDLCALDKDSRVTSLAFGNDDQTEILLGRAKDAV 79
            |::.::|||.||..|.:.....:.    .|.:|:.:|.|...||::.:|:..::|:.||.....|
 Frog     5 ARNHVWVGTETGILKGINLQKRQA----INYTDVGSLTKGQEVTAMCWGDPQESEVFLGCGDGTV 65

  Fly    80 EIHS-----FTEKGHSRNTVSFNAAPIVGLARYNDKLIAGIGN--------GEIQSLELEANDES 131
            .:.|     |||....|.    ......|||..::.|:..:.:        ||..|||::     
 Frog    66 RVFSNEKSKFTEIHECRG----GEGTFKGLAVVDNALVTCVESGLLKVWKAGEFDSLEVQ----- 121

  Fly   132 EPVVIATGDQMDHLRQCAQVKSIVATGGKERQNNLKVYDLNADGKQIFTSKNLPNDYLQLEVPVW 196
                  .|..::.:|||........|||||  |:||::||....:.:|.:|||.||:|.|.||||
 Frog   122 ------VGAGIEKMRQCETQNQRFGTGGKE--NDLKIWDLERPEEPVFRAKNLRNDWLDLRVPVW 178

  Fly   197 DSDIGFVDGPSVLATCSRTGYVRIYD-TRKQRRPVACFASEEHGMSFTTLVAKGNFIYTGTTMGA 260
            ..|:||:.|...:.||:....||||| :..|||||.....||..::..::...|..:..|.:.|.
 Frog   179 IKDLGFIPGSEKIVTCTGHHQVRIYDPSSPQRRPVLEVLYEEDPLTALSITPDGRSVIVGNSHGN 243

  Fly   261 LKAFDTRRMKTHVHTYKGFTGGISDLHLDATGRFLSSASLDRYVRIHDSETTVLLYQCYVKSKAT 325
            :...|.|:.:. :...||..|.|..:...::...::|..|||::|||:.|...|.::.|:||:..
 Frog   244 MAVIDLRKGRL-LCALKGSAGSIRSIQCHSSMPIVASCGLDRFLRIHNYENKELQHKVYLKSRLN 307

  Fly   326 KILI--RPFENEARVTEEPEEVADLQMDRNVSENKSVNATSVDNEYEDMFDQMPTVGDSDNESEE 388
            .:|:  |....|..||...|:                   .|..|.::::|.|.||.|..::..:
 Frog   308 CLLLTSRDKWEEDDVTSAAEQ-------------------DVKEEEDEVWDNMETVVDKTSKKRQ 353

  Fly   389 EMSNIKLSKADLKRRSSEKSLKN---KKKK 415
                      .::.|:.|...||   ||||
 Frog   354 ----------GVQIRALEAGTKNPTRKKKK 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k09848NP_610200.1 Nsa1_WDR74-like 52..329 CDD:459257 87/290 (30%)
WD40 repeat 55..90 CDD:439302 11/39 (28%)
WD40 repeat 100..135 CDD:439302 9/42 (21%)
WD40 repeat 143..183 CDD:439302 14/39 (36%)
WD40 repeat 146..184 CDD:293791 15/37 (41%)
WD40 repeat 198..244 CDD:439302 18/46 (39%)
WD40 repeat 240..277 CDD:293791 5/36 (14%)
WD40 repeat 247..282 CDD:439302 7/34 (21%)
WD40 repeat 283..309 CDD:293791 8/25 (32%)
WD40 repeat 284..319 CDD:439302 9/34 (26%)
wdr74NP_001005144.1 WDR74 15..321 CDD:439303 96/327 (29%)
WD40 repeat 16..38 CDD:439303 4/25 (16%)
WD40 repeat 41..79 CDD:439303 11/37 (30%)
WD40 repeat 43..83 CDD:293791 11/39 (28%)
WD40 repeat 87..122 CDD:439303 9/45 (20%)
WD40 repeat 125..165 CDD:439303 14/41 (34%)
WD40 repeat 127..165 CDD:293791 14/39 (36%)
WD40 repeat 179..215 CDD:293791 16/35 (46%)
WD40 repeat 180..227 CDD:439303 18/46 (39%)
WD40 repeat 224..259 CDD:293791 5/35 (14%)
WD40 repeat 230..263 CDD:439303 7/33 (21%)
WD40 repeat 266..301 CDD:439303 9/34 (26%)

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