DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k09848 and wdr61

DIOPT Version :9

Sequence 1:NP_001188867.1 Gene:l(2)k09848 / 35536 FlyBaseID:FBgn0284246 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_957147.1 Gene:wdr61 / 393827 ZFINID:ZDB-GENE-040426-1851 Length:305 Species:Danio rerio


Alignment Length:275 Identity:57/275 - (20%)
Similarity:92/275 - (33%) Gaps:92/275 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DSRVTSLAFG---NDDQTEILLGRAKDAVEIHSFTE---------KGHSRNTVSFNAAPIVGLAR 106
            :..:.:.|:|   .|....|:.|...|.|::..:::         :||....||.|.:.      
Zfish    16 EDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ------ 74

  Fly   107 YNDKLIAGIGNGEIQSLELEANDESEPVVIATGDQMD-HLRQCAQVKSIVATGGKERQNNLKVYD 170
                      ||                .||....:| |:|                     ::|
Zfish    75 ----------NG----------------AIAASSSLDAHIR---------------------LWD 92

  Fly   171 LNADGKQIFTSKNLPNDYLQLEVPVWDSDIGFVDGPSVLATCSRTGYVRIYDTRKQRRPVACFAS 235
            |.. ||||.:....|       |..|  .:.|......:||.|..|.|.|:.....::       
Zfish    93 LET-GKQIKSMDAGP-------VDAW--TVAFSPDSKYIATGSHLGKVNIFGVESGKK------- 140

  Fly   236 EEHGM----SFTTLVA---KGNFIYTGTTMGALKAFDTRRMKTHVHTYKGFTGGISDLHLDATGR 293
             ||.:    .|...:|   .|.::.:|...|.:..||....|. :||.:|....|..|......:
Zfish   141 -EHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQ 203

  Fly   294 FLSSASLDRYVRIHD 308
            .|.:||.|.|::|:|
Zfish   204 LLVTASDDGYIKIYD 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k09848NP_001188867.1 WD40 36..>327 CDD:225201 57/275 (21%)
WD40 55..318 CDD:295369 57/274 (21%)
WD40 repeat 146..184 CDD:293791 7/37 (19%)
WD40 repeat 240..277 CDD:293791 10/43 (23%)
WD40 repeat 283..309 CDD:293791 9/26 (35%)
wdr61NP_957147.1 WD40 <14..304 CDD:225201 57/275 (21%)
WD 1 14..57 7/40 (18%)
WD40 15..302 CDD:238121 57/275 (21%)
WD40 repeat 19..62 CDD:293791 7/42 (17%)
WD 2 62..101 18/92 (20%)
WD40 repeat 68..106 CDD:293791 16/91 (18%)
WD 3 104..143 11/55 (20%)
WD40 repeat 110..146 CDD:293791 10/45 (22%)
WD 4 146..187 10/41 (24%)
WD40 repeat 152..188 CDD:293791 9/36 (25%)
WD 5 188..227 10/31 (32%)
WD40 repeat 193..229 CDD:293791 9/26 (35%)
WD 6 230..269
WD40 repeat 236..271 CDD:293791
WD 7 272..305
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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