DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k09848 and T06E6.1

DIOPT Version :9

Sequence 1:NP_001188867.1 Gene:l(2)k09848 / 35536 FlyBaseID:FBgn0284246 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_506824.1 Gene:T06E6.1 / 180039 WormBaseID:WBGene00011538 Length:431 Species:Caenorhabditis elegans


Alignment Length:415 Identity:116/415 - (27%)
Similarity:212/415 - (51%) Gaps:31/415 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ELYVGTHTGSFKHLVPASEKTPYGQSNLSDLCALD-KDSRVTSLAFGNDDQTEILLGRAKDAVEI 81
            :.|||..||:.|..: ..|.|   ..||:::.:|| |...:||:.:.::.|||||:.|....:::
 Worm     2 DCYVGATTGALKGAI-LKENT---FQNLNEIKSLDPKSDEITSMIWNDEQQTEILIARVNRDLQL 62

  Fly    82 HSFTEKG-HSRNTVSFNAAPIVGLARYNDKLIAGIGNGEIQSLELEANDESEPVVIA---TGDQM 142
            ....|.. .|..||:....||.||.:.::|::..:.:||:|..    ||:||  :::   ||..:
 Worm    63 LGIEENELVSILTVTGGTGPIKGLHKADEKIVTCVESGELQIW----NDKSE--ILSEWKTGPGV 121

  Fly   143 DHLRQCAQVKSIVATGGKERQNNLKVYDLNADGKQIFTSKNLPNDYLQLEVPVWDSDIGFVDGPS 207
            ..:|...:...|| |||  .:|.||.::|.. |:|.:::||:|.|.|.||:|:..:|..|:.|.:
 Worm   122 AVMRGSTEKPEIV-TGG--MKNLLKTWNLET-GQQTWSAKNVPPDMLGLEIPIMITDARFIPGQN 182

  Fly   208 VLATCSRTGYVRIYDTRKQRRPVACFASEEHGMSFTTLVAKGNFIYTGTTMGALKAFDTRRMKTH 272
            .:...::...:|:||.|.|||||......|:.:..|:|..|.|.|....::|.:..||.|.....
 Worm   183 TILEATKLHEMRLYDPRAQRRPVKKIPFMENPIMCTSLTYKTNQILAANSIGEMGLFDLRSKVHP 247

  Fly   273 VHTYKGFTGGISDLHLDATGRFLSSASLDRYVRIHDSETTVLLYQCYVKSKATKILIR------- 330
            :..:||..|.|..:....|....:|..:||::|:||.::..|:::.|.|::..::|:|       
 Worm   248 MCKFKGQAGSIRSITAHPTLPLAASVGIDRFLRVHDLQSRKLIHKIYCKTRLNRVLLRDNLSILN 312

  Fly   331 ---PFENEARVTEEPEEVADLQMDRNVSENKSVNATSVDNEYEDMFDQMPTVGDSDNESEEEMSN 392
               | .::..:.|:..|..::..|...|||:.........|.:|::..|..|..:...|::::..
 Worm   313 DKKP-ASKKEINEDETEYGNMTKDGYRSENEDDEDDDDVIEEDDVWGVMEPVKRAKKSSDDDVEE 376

  Fly   393 IKLSKADLKRRSSEKSLKNKKKKVV 417
            |:::...: ...|:.|.|.|:|.|:
 Worm   377 IQITSETI-AVPSKNSQKLKRKNVL 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k09848NP_001188867.1 WD40 36..>327 CDD:225201 89/295 (30%)
WD40 55..318 CDD:295369 80/266 (30%)
WD40 repeat 146..184 CDD:293791 13/37 (35%)
WD40 repeat 240..277 CDD:293791 9/36 (25%)
WD40 repeat 283..309 CDD:293791 7/25 (28%)
T06E6.1NP_506824.1 WD40 <22..286 CDD:225201 84/273 (31%)
WD40 27..293 CDD:295369 83/275 (30%)
WD40 repeat 38..78 CDD:293791 12/39 (31%)
WD40 repeat 121..160 CDD:293791 14/42 (33%)
WD40 repeat 173..209 CDD:293791 12/35 (34%)
WD40 repeat 215..252 CDD:293791 9/36 (25%)
WD40 repeat 258..297 CDD:293791 10/38 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163387
Domainoid 1 1.000 149 1.000 Domainoid score I2710
eggNOG 1 0.900 - - E1_KOG3881
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I2974
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56769
OrthoDB 1 1.010 - - D1439033at2759
OrthoFinder 1 1.000 - - FOG0004298
OrthoInspector 1 1.000 - - oto20315
orthoMCL 1 0.900 - - OOG6_103653
Panther 1 1.100 - - LDO PTHR16038
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R841
SonicParanoid 1 1.000 - - X3557
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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