DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa2-R and GPR37L1

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_004758.3 Gene:GPR37L1 / 9283 HGNCID:14923 Length:481 Species:Homo sapiens


Alignment Length:408 Identity:94/408 - (23%)
Similarity:174/408 - (42%) Gaps:48/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LADSDGNGANDSGLLATGQGLEQEQEGLALDMGHNASADGGIV----PYVPVLDRP-ETYIVTVL 75
            |..:..|...|.|...:||.|.          |:...|.|..:    |..||.:.. ..|.:.:|
Human    82 LVATSPNPGKDGGTPDSGQELR----------GNLTGAPGQRLQIQNPLYPVTESSYSAYAIMLL 136

  Fly    76 YTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESWPFERN 140
            ..::|.||::||.:::.|.:....:::..|:.:.||||.|.||:..|:|:  :::.:.:  .:|.
Human   137 ALVVFAVGIVGNLSVMCIVWHSYYLKSAWNSILASLALWDFLVLFFCLPI--VIFNEIT--KQRL 197

  Fly   141 M----CRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPLTVFTAVM-----IWILAI 196
            :    ||...|.:..|:||:.|:|.||..:|:....:.|.|:  :|:....:::     ||:.::
Human   198 LGDVSCRAVPFMEVSSLGVTTFSLCALGIDRFHVATSTLPKV--RPIERCQSILAKLAVIWVGSM 260

  Fly   197 LLGMPSVLFSDIKSYPVFTATGNMTIEVCSPFRD-PE--YAKFMVAGKALV------YYLLPLSI 252
            .|.:|.:|...:...|..| .|.:...:..|... ||  |:..|....|.:      |:.||:  
Human   261 TLAVPELLLWQLAQEPAPT-MGTLDSCIMKPSASLPESLYSLVMTYQNARMWWYFGCYFCLPI-- 322

  Fly   253 IGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHF 317
               |:.:..:.:....|..||.:...::....:....:...||...||:..|..|.:|..:...:
Human   323 ---LFTVTCQLVTWRVRGPPGRKSECRASKHEQCESQLNSTVVGLTVVYAFCTLPENVCNIVVAY 384

  Fly   318 YPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHFNRYLCCICVKRQPHLRQHST 382
            ..|  |...:..::|.::...::|....:.||.|.|:.....|.|....||.|.:......:.|.
Human   385 LST--ELTRQTLDLLGLINQFSTFFKGAITPVLLLCICRPLGQAFLDCCCCCCCEECGGASEASA 447

  Fly   383 ATGMMDNTSVMSMRRSTY 400
            |.| .||.....:..|.|
Human   448 ANG-SDNKLKTEVSSSIY 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 70/309 (23%)
TM helix 1 71..97 CDD:320593 7/25 (28%)
TM helix 2 104..130 CDD:320593 10/25 (40%)
TM helix 3 142..172 CDD:320593 11/29 (38%)
TM helix 4 182..202 CDD:320593 4/24 (17%)
TM helix 5 234..259 CDD:320593 6/30 (20%)
TM helix 6 285..315 CDD:320593 7/29 (24%)
TM helix 7 330..355 CDD:320593 6/24 (25%)
GPR37L1NP_004758.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..58
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..108 8/35 (23%)
7tm_1 147..397 CDD:278431 58/263 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.