DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and npy1r

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001095861.1 Gene:npy1r / 793668 ZFINID:ZDB-GENE-080221-1 Length:380 Species:Danio rerio


Alignment Length:344 Identity:92/344 - (26%)
Similarity:162/344 - (47%) Gaps:29/344 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 IVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYT-QES 134
            |:.|.|:.:.::||:||..|:::..|.|.:.|:.|..|.:|:::|||:.:||:|. |.:|| .:.
Zfish    48 IMAVAYSAVVLLGVIGNLALILVIARQRELHNVTNVLIANLSVSDLLMAVVCLPF-TFIYTFMDH 111

  Fly   135 WPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPLTVFTAVMIWILAILLG 199
            |.|...||:::...:..|:.||:|:|..::.||:..|::|.....:.........:.|.||:|..
Zfish   112 WVFGAVMCKLNSLVQCCSVSVSIFSLVLIAIERHQLILHPRGWRPSLNHACLGISLTWALAVLTA 176

  Fly   200 MPSVLFSDIKSYP------VFTATGNMTIEVCSPFRDPEYAKFMVAGKALVYYLLPLSIIGALYI 258
            .|.:|||.:...|      ||.......:.....:...|.......|..::.|:.||:.|...|:
Zfish   177 TPFLLFSRVTDAPLKQLPSVFQEQYRGKVVCVEEWPSREIKLTYTTGMLVLQYITPLTFIFICYL 241

  Fly   259 MMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFEL---WYHFYPT 320
            .:..|| ....||....:..:.|:....|:::  |:.:.||.|.:|:.|.:||..   |.|    
Zfish   242 KIYTRL-QRRNNMMERIRENKYRSSESKRINI--MLFSIVVAFAVCWLPLNVFNAVIDWNH---- 299

  Fly   321 AEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHFNR-----YLCCICVKRQPHLRQH 380
             |...:...|:|..:...|:..:.|:||| .|   |...::|.|     .||.|...|:......
Zfish   300 -EVAMNCTHNLLFSLCHLTAMCSVCINPV-FY---GFLNRNFQRDLRAFRLCKIVSTRENEYDMV 359

  Fly   381 STATGMMDNTSVMSMRRST 399
            :.:|...| .|.||::.|:
Zfish   360 AMSTVNTD-VSKMSLKMSS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 80/300 (27%)
TM helix 1 71..97 CDD:320593 8/25 (32%)
TM helix 2 104..130 CDD:320593 10/25 (40%)
TM helix 3 142..172 CDD:320593 8/29 (28%)
TM helix 4 182..202 CDD:320593 4/19 (21%)
TM helix 5 234..259 CDD:320593 6/24 (25%)
TM helix 6 285..315 CDD:320593 9/32 (28%)
TM helix 7 330..355 CDD:320593 8/24 (33%)
npy1rNP_001095861.1 7tmA_NPY1R 47..340 CDD:320517 82/304 (27%)
TM helix 1 48..74 CDD:320517 8/25 (32%)
TM helix 2 81..106 CDD:320517 10/25 (40%)
TM helix 3 119..149 CDD:320517 8/29 (28%)
TM helix 4 160..181 CDD:320517 5/20 (25%)
TM helix 5 217..246 CDD:320517 6/28 (21%)
TM helix 6 265..295 CDD:320517 9/31 (29%)
TM helix 7 308..333 CDD:320517 9/28 (32%)

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