DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa2-R and ednrb2

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_012824137.1 Gene:ednrb2 / 780133 XenbaseID:XB-GENE-1219159 Length:435 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593
TM helix 1 71..97 CDD:320593
TM helix 2 104..130 CDD:320593
TM helix 3 142..172 CDD:320593
TM helix 4 182..202 CDD:320593
TM helix 5 234..259 CDD:320593
TM helix 6 285..315 CDD:320593
TM helix 7 330..355 CDD:320593
ednrb2XP_012824137.1 7tmA_ET-CR 90..385 CDD:320643
TM helix 1 91..117 CDD:320643
TM helix 2 124..150 CDD:320643
TM helix 3 162..192 CDD:320643
TM helix 4 204..224 CDD:320643
TM helix 5 258..283 CDD:320643
TM helix 6 304..334 CDD:320643
TM helix 7 353..378 CDD:320643
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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