DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and BRS3

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001718.1 Gene:BRS3 / 680 HGNCID:1113 Length:399 Species:Homo sapiens


Alignment Length:354 Identity:122/354 - (34%)
Similarity:191/354 - (53%) Gaps:16/354 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESWP 136
            :.:.|.:|..||:|||..|:.:||:.:||:.:||.:|.|||..|||::|.||||....|..|.|.
Human    50 IYITYAVIISVGILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWL 114

  Fly   137 FERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPL--TVFTAVMIWILAILLG 199
            |.|..|::..|.:..|:||||||||.||.:||.|:|.||.:..:..:  |...|..:||::::..
Human   115 FGRIGCKVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFA 179

  Fly   200 MPSVLFSDIKSYPVFTATGNMTIEVCSPFRDPEYAKFMVAGKA----LVYYLLPLSIIGALYIMM 260
            :|..:||::  |.......|||.|.|:.:  |...|.:....:    ||:|::|||||...|.::
Human   180 LPEAIFSNV--YTFRDPNKNMTFESCTSY--PVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLI 240

  Fly   261 AKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFYPTAEEDF 325
            |:.|:.|..|:|.|:|| .:|.|..:|..:||.|:..|.:|.:|:.|.|:..|::.|......|.
Human   241 ARTLYKSTLNIPTEEQS-HARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQTYVDP 304

  Fly   326 DEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHFNRYL-CCICVKRQPHLRQHSTAT----G 385
            .....:..|.....:|.||||||.|||.:|..|::||...| ||...:.:|.:...|..|    |
Human   305 SAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADTSLTTLAVMG 369

  Fly   386 MMDNTSVMSMRRSTYVGGTAGNLRASLHR 414
            .:..|..:.|...:....|..:::.:..|
Human   370 TVPGTGSIQMSEISVTSFTGCSVKQAEDR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 109/295 (37%)
TM helix 1 71..97 CDD:320593 10/24 (42%)
TM helix 2 104..130 CDD:320593 14/25 (56%)
TM helix 3 142..172 CDD:320593 16/29 (55%)
TM helix 4 182..202 CDD:320593 4/21 (19%)
TM helix 5 234..259 CDD:320593 10/28 (36%)
TM helix 6 285..315 CDD:320593 10/29 (34%)
TM helix 7 330..355 CDD:320593 11/24 (46%)
BRS3NP_001718.1 7tmA_BRS-3 48..341 CDD:320251 109/295 (37%)
TM helix 1 49..75 CDD:320251 10/24 (42%)
TM helix 2 82..108 CDD:320251 14/25 (56%)
TM helix 3 120..150 CDD:320251 16/29 (55%)
TM helix 4 162..182 CDD:320251 4/19 (21%)
TM helix 5 214..239 CDD:320251 9/24 (38%)
TM helix 6 264..294 CDD:320251 10/29 (34%)
TM helix 7 309..334 CDD:320251 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 177 1.000 Domainoid score I3598
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1307
Inparanoid 1 1.050 217 1.000 Inparanoid score I3601
Isobase 1 0.950 - 0 Normalized mean entropy S5926
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153238at2759
OrthoFinder 1 1.000 - - FOG0001846
OrthoInspector 1 1.000 - - mtm8658
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4897
SonicParanoid 1 1.000 - - X1046
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1313.010

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