DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and ednrbb

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_688565.1 Gene:ednrbb / 560081 ZFINID:ZDB-GENE-081105-182 Length:408 Species:Danio rerio


Alignment Length:376 Identity:110/376 - (29%)
Similarity:179/376 - (47%) Gaps:43/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NASADGGIVPYVPV-LDRPETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLAL 113
            ||:.:.|.|...|| :.....||.:|:..::|::|:|||.||:.|...|:.||..||..|.||||
Zfish    39 NATENRGPVCSAPVRIKDVFKYISSVVSCVVFLLGMLGNITLLTIIKEHKCMRKGPNIVIGSLAL 103

  Fly   114 ADLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKL 178
            .|:|.|::.:||.........|||....|::..|.:..|:|::|.:|..||.:|| .:|:...::
Zfish   104 GDILHIVIGLPVNVYKILAVDWPFGVVFCKLVPFIQKTSVGITVLSLCVLSIDRY-RVVSSRSRI 167

  Fly   179 QTKPLTVFTAV---MIWILAILLGMP-SVLFSDIKSYPVFTATGNMTIEVC--SPFRDPEYAKFM 237
            :......:|.:   :||:::..|..| :|.|..|    .....|. .:.:|  .|.::..:.:|.
Zfish   168 KGPSFPKWTLIKLCVIWVISAFLAAPEAVAFDQI----TMDYRGE-RLRICLLHPVQNNAFMQFY 227

  Fly   238 VAGK----ALVYYLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFV 298
            ...|    .|.|::.|||.....|.:|..|:      :..:|.::..  ..:.|..|||.|...|
Zfish   228 KVAKDWWLLLFYFVFPLSCTAVFYSLMTWRI------LRVQQSALHK--HRKQRREVARTVFCLV 284

  Fly   299 VVFFICFFPYHVFELWYHFYPTAEEDFD-----EFWNVLRIVGFCTSFLNSCVNPVALYCVSGVF 358
            :||.:|:||.|:..: .......|:|.|     ..:.||..:|...:.:|||:||||||.||..:
Zfish   285 LVFAVCWFPLHLSRI-LRMILYDEQDPDRCRLLSTFLVLDYIGLNMASINSCINPVALYVVSKRY 348

  Fly   359 RQHFNRYL--CCICVKRQPHL---------RQHSTATGMMDNTSVMSMRRS 398
            :.:|...|  ||...|....|         ..||.:: ..:.||..|.|:|
Zfish   349 KNYFREALWRCCKRSKVTESLVRSKVTEPPTDHSDSS-KQEQTSGDSQRKS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 91/306 (30%)
TM helix 1 71..97 CDD:320593 10/25 (40%)
TM helix 2 104..130 CDD:320593 12/25 (48%)
TM helix 3 142..172 CDD:320593 10/29 (34%)
TM helix 4 182..202 CDD:320593 5/23 (22%)
TM helix 5 234..259 CDD:320593 8/28 (29%)
TM helix 6 285..315 CDD:320593 12/29 (41%)
TM helix 7 330..355 CDD:320593 12/24 (50%)
ednrbbXP_688565.1 7tm_1 76..339 CDD:278431 78/277 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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