DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa2-R and gpr151

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_009289581.1 Gene:gpr151 / 497134 ZFINID:ZDB-GENE-050128-2 Length:418 Species:Danio rerio


Alignment Length:317 Identity:80/317 - (25%)
Similarity:142/317 - (44%) Gaps:35/317 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 IVTVLYTLIFIVGVLGNGTL--VIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQE 133
            ::.||..:|.::|..||.|.  |:|....:|..::.|..||:|.:||.||:...||.....|::.
Zfish    38 LIPVLLGVICVLGFSGNVTAMGVLITNARKSKLSLINGLILNLMMADGLVLAFTVPFRAAAYSRA 102

  Fly   134 SWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPLTVFTAVMI-WILAIL 197
            ||.....:|:..::|....:....||:..::...|..:.||.:::..:..|:...:|: |:||.:
Zfish   103 SWTLGLFICKTCDWFLHSCMAAKSFTVAIMAKACYRYVSNPTKQVSIRMKTILVVLMLAWLLACV 167

  Fly   198 LGMPSVLFSDIKSYPVFTATGNMTIEVCSPFRDPEYAKFMVAGKALVYYLLPLSIIGALYIMMA- 261
            |.:|..|||.::..|    .|.:.:::. |.....:....|....|:.|.:||| :..||...| 
Zfish   168 LPLPQWLFSKLQKEP----NGMVCVQMV-PLHAHNFMSIYVKAYPLLAYCMPLS-VALLYFWKAY 226

  Fly   262 ---KRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFYPTAEE 323
               :|.....:|:         |||.|:| .:..|:.:..|.....:.|..|..:|...   |.|
Zfish   227 GRCQRRSSKTQNL---------RTQIRSR-KLTLMLFSLTVAMASMWLPQWVSWVWMRH---AVE 278

  Fly   324 DFDEFWNVLRIVGFCTS-----FLNSCVNPVALYCVSGVFRQHFNRYLCCICVKRQP 375
            ....|..||    |..|     |..|.:||:.:..:|..||:.:......:.:::||
Zfish   279 TGGGFPPVL----FSLSAQILMFSISLINPLIVLSLSEEFREGYIDLWRRLTLRKQP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 78/302 (26%)
TM helix 1 71..97 CDD:320593 9/27 (33%)
TM helix 2 104..130 CDD:320593 10/25 (40%)
TM helix 3 142..172 CDD:320593 5/29 (17%)
TM helix 4 182..202 CDD:320593 6/20 (30%)
TM helix 5 234..259 CDD:320593 8/24 (33%)
TM helix 6 285..315 CDD:320593 6/29 (21%)
TM helix 7 330..355 CDD:320593 8/29 (28%)
gpr151XP_009289581.1 7tm_1 53..306 CDD:278431 71/275 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45695
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.