DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and AstA-R1

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster


Alignment Length:395 Identity:102/395 - (25%)
Similarity:176/395 - (44%) Gaps:62/395 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DSDGNGANDSGLLATGQGLEQEQEGLALDMGHNASADGGIVPYVPVLDRPETYIVTVLYTLIFIV 82
            |...:.||||        :|.:.|.:|                   |:|..:.||.|.:.:|...
  Fly    50 DHSDHNANDS--------MEYDAESVA-------------------LERIVSTIVPVFFGIIGFA 87

  Fly    83 GVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESWPFERNMCRISEF 147
            |:||||.::::...::.||:..|..|::||::|:|.::.|||.....|....|||....|:..::
  Fly    88 GLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQY 152

  Fly   148 FKDISIGVSVFTLTALSGERYCAIVNPL--RKLQTKPLTVFTAVMIWILAILLGMPSVLFSDIKS 210
            ...::...||:||..:|.:|:.|:|:|:  ..|:|:.......:..||..:...:|..|...::.
  Fly   153 MIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRI 217

  Fly   211 YPVFTATGNMTIEVCSPFRDPEYAKFMVAGKA---LVYYLLPLSIIGALYIMMAKRLHMSARNMP 272
            |......|...:     |...|....:|..:.   |..|:.||::|..||:.|..||..||   |
  Fly   218 YQYHGNAGTACV-----FSTEEEIWSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSA---P 274

  Fly   273 GEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELW--YHFYPTAEEDFDEFWNVLRIV 335
            |.:.|.:||   :.:..|.||||..|:.|.||:.|.||..:.  .:.|..:....     :::|:
  Fly   275 GCKPSAESR---KGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGSHLSV-----IIQII 331

  Fly   336 GFCTSFLNSCVNPVALYCVSGVFRQHFNRYLCCICVKRQPHLRQHSTATGMMDNTSVMSMRRSTY 400
            ....::.|||:||:....:|..||:.|.:.:.|            .:...:|.|..|....|:..
  Fly   332 SHVVAYTNSCINPILYAFLSDNFRKAFRKVVWC------------GSPPPLMTNQQVTKTTRTAT 384

  Fly   401 VGGTA 405
            ..||:
  Fly   385 GNGTS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 84/298 (28%)
TM helix 1 71..97 CDD:320593 9/25 (36%)
TM helix 2 104..130 CDD:320593 9/25 (36%)
TM helix 3 142..172 CDD:320593 8/29 (28%)
TM helix 4 182..202 CDD:320593 2/19 (11%)
TM helix 5 234..259 CDD:320593 8/27 (30%)
TM helix 6 285..315 CDD:320593 12/31 (39%)
TM helix 7 330..355 CDD:320593 6/24 (25%)
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 84/298 (28%)
TM helix 1 76..102 CDD:320224 9/25 (36%)
TM helix 2 109..135 CDD:320224 9/25 (36%)
TM helix 3 147..177 CDD:320224 8/29 (28%)
TM helix 4 189..209 CDD:320224 2/19 (11%)
TM helix 5 239..268 CDD:320224 9/28 (32%)
TM helix 6 284..314 CDD:320224 12/29 (41%)
TM helix 7 326..351 CDD:320224 6/29 (21%)

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