Protein Alignment CCHa2-R and RYa-R

DIOPT Version :10

• Sequence 1: NP_001356958.1
• Gene: CCHa2-R / 35535
• FlyBaseID: FBgn0033058
• Length: 501
• Species: Drosophila melanogaster
• Sequence 2: NP_001287552.1
• Gene: RYa-R / 43253
• FlyBaseID: FBgn0004842
• Length: 518
• Species: Drosophila melanogaster
• Alignment Length: 480
• Identity: 120/480 - (25%)
• Similarity: 202/480 - (42%)
• Gaps: 105/480 - (21%)

  Fly    19 SDGNGAN-DSGLLATGQGLEQEQEGLALDMGHNA------SADGGIVPYVPVLDRPETYIVTVLY 76
            :|..|:| ..|...|..||:.|...:.:.|..:.      |.|.....|..:       ||.:||
  Fly    55 ADDEGSNYGYGSTTTLSGLQFETYNITVMMNFSCDDYDLLSEDMWSSAYFKI-------IVYMLY 112

  Fly    77 TLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATI-VYTQESWPFERN 140
            ..|||..::||||:..|.:....||.:.|.:|.|||:.|:|:...|||.:.| ::....|||...
  Fly   113 IPIFIFALIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSSFISLFILNYWPFGLA 177

  Fly   141 MCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPLTVFTAVMIWILAILLGMPSVLF 205
            :|....:.:.:|:.||.:||.|:|.:||.||:.||:...||....|....:|.:|:...:|..:.
  Fly   178 LCHFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRITKRYATFIIAGVWFIALATALPIPIV 242

  Fly   206 S--DIKSYPVFTATGNMTIEVCSPFRDPEYAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHMSA 268
            |  ||...|..|...........|.|..||  :.......:.:::||.::...|..:..|:.  |
  Fly   243 SGLDIPMSPWHTKCEKYICREMWPSRTQEY--YYTLSLFALQFVVPLGVLIFTYARITIRVW--A 303

  Fly   269 RNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFYPTAEEDFDEFWNVLR 333
            :..|||.::.:.:..||::..:.:|::..|:||..|:.|:::.:|..:     :|:| ..|:.|.
  Fly   304 KRPPGEAETNRDQRMARSKRKMVKMMLTVVIVFTCCWLPFNILQLLLN-----DEEF-AHWDPLP 362

  Fly   334 IVGFCTSFL---NSCVNPVALYC-VSGVFRQHFNRYL---------CC----------------- 368
            .|.|...:|   :.|.||: :|| ::..||..|.:.:         ||
  Fly   363 YVWFAFHWLAMSHCCYNPI-IYCYMNARFRSGFVQLMHRMPGLRRWCCLRSVGDRMNATSGEMTT 426

  Fly   369 ---------------ICVKRQP-----------HLRQHS--------------------TATGMM 387
                           ||::...           ||.|.|                    ||..::
  Fly   427 KYHRHVGDALFRKPKICIRNGSSTSSQSNEHIHHLHQRSSKATSDIFASEPIIVRRDVTTAVAVI 491

  Fly   388 D-NTSVMSMRRSTYVGGTAGNLRAS 411
            . |.:...:|||...|||..|:|::
  Fly   492 SKNKTDSPVRRSGSSGGTEANIRST 516

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CCHa2-R	NP_001356958.1	7tmA_Bombesin_R-like	70..362	CDD:320593	88/298 (30%)
		TM helix 1	71..97	CDD:320593	12/25 (48%)
		TM helix 2	104..130	CDD:320593	11/26 (42%)
		TM helix 3	142..172	CDD:320593	11/29 (38%)
		TM helix 4	182..202	CDD:320593	3/19 (16%)
		TM helix 5	234..259	CDD:320593	3/24 (13%)
		TM helix 6	285..315	CDD:320593	8/29 (28%)
		TM helix 7	330..355	CDD:320593	9/28 (32%)
RYa-R	NP_001287552.1	7tmA_PR4-like	106..394	CDD:320514	88/305 (29%)
		TM helix 1	107..133	CDD:320514	12/25 (48%)
		TM helix 2	140..165	CDD:320514	10/24 (42%)
		TM helix 3	179..209	CDD:320514	11/29 (38%)
		TM helix 4	220..241	CDD:320514	4/20 (20%)
		TM helix 5	271..300	CDD:320514	5/30 (17%)
		TM helix 6	320..350	CDD:320514	8/29 (28%)
		TM helix 7	362..387	CDD:320514	8/25 (32%)