Protein Alignment CCHa2-R and CCHa1-R

DIOPT Version :10

• Sequence 1: NP_001356958.1
• Gene: CCHa2-R / 35535
• FlyBaseID: FBgn0033058
• Length: 501
• Species: Drosophila melanogaster
• Sequence 2: NP_611241.2
• Gene: CCHa1-R / 37004
• FlyBaseID: FBgn0050106
• Length: 499
• Species: Drosophila melanogaster
• Alignment Length: 421
• Identity: 202/421 - (47%)
• Similarity: 258/421 - (61%)
• Gaps: 57/421 - (13%)

  Fly     6 MDVGQTLAARLADSDGNGANDSGLLATGQGLEQEQEGLALDMGHNASADGGIVPYVPVLDRPETY 70
            |.|.|:....|.|: |:..|.|.|:.|.                        .||||...|||||
  Fly    43 MVVSQSTQWPLLDT-GSSENFSELVTTE------------------------TPYVPYGRRPETY 82

  Fly    71 IVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESW 135
            ||.:|:.|||:|||||||||:::|...|.|||:||||||||||||||||:..||:|:.|||.|.|
  Fly    83 IVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLASTVYTVEYW 147

  Fly   136 PFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKL-------QTKPLTVFTAVMIWI 193
            |:...:|.:|||.||:||||||||||||||:||.|||:||||.       :...:|:.|||.||:
  Fly   148 PYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRMTLATAVSIWL 212

  Fly   194 LAILLGMPSVLFSDIKSYPVFTATGNMTIEVCSPFRDPE-----YAKFMVAGKALVYYLLPLSII 253
            ||||.|:|:::.|::|...:    ...:|.:|.|:  ||     |||.||....||||.:||.:|
  Fly   213 LAILCGLPALIGSNLKHLGI----NEKSIVICYPY--PEEWGINYAKSMVLLHFLVYYAIPLVVI 271

  Fly   254 GALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFY 318
            ...|:::|..|..|| ::|||.|.  :..|.|||..||..|:||||:|.|||.|||||.||::|:
  Fly   272 AVFYVLIALHLMYSA-SVPGEIQG--AVRQVRARRKVAVTVLAFVVIFGICFLPYHVFFLWFYFW 333

  Fly   319 PTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHFNRYLCCICVK-RQPHLRQHST 382
            |||::|::.||:|||||.:|.||.|||.||||||.|||.||:||||||.|.... |:....||.|
  Fly   334 PTAQDDYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKRGQHDT 398

  Fly   383 ATGMMDNTSVMSMRRSTYVGGTAGNLRASLH 413
                      ..|.|.|.:..||.....|.|
  Fly   399 ----------FCMHRDTSLTSTASKRFQSRH 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CCHa2-R	NP_001356958.1	7tmA_Bombesin_R-like	70..362	CDD:320593	166/303 (55%)
		TM helix 1	71..97	CDD:320593	16/25 (64%)
		TM helix 2	104..130	CDD:320593	19/25 (76%)
		TM helix 3	142..172	CDD:320593	23/29 (79%)
		TM helix 4	182..202	CDD:320593	11/19 (58%)
		TM helix 5	234..259	CDD:320593	12/24 (50%)
		TM helix 6	285..315	CDD:320593	20/29 (69%)
		TM helix 7	330..355	CDD:320593	17/24 (71%)
CCHa1-R	NP_611241.2	7tmA_Bombesin_R-like	82..377	CDD:320593	166/303 (55%)
		TM helix 1	83..109	CDD:320593	16/25 (64%)
		TM helix 2	116..142	CDD:320593	19/25 (76%)
		TM helix 3	154..184	CDD:320593	23/29 (79%)
		TM helix 4	201..221	CDD:320593	11/19 (58%)
		TM helix 5	252..277	CDD:320593	12/24 (50%)
		TM helix 6	300..330	CDD:320593	20/29 (69%)
		TM helix 7	345..370	CDD:320593	17/24 (71%)