DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and Pgr15l

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001100053.1 Gene:Pgr15l / 296867 RGDID:1562685 Length:456 Species:Rattus norvegicus


Alignment Length:302 Identity:81/302 - (26%)
Similarity:147/302 - (48%) Gaps:47/302 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 IVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESW 135
            ::|..|.:|.::.:.||..:..:|.:|:..:......|.:||::|:|:||:..|.|...:....|
  Rat    74 VLTFAYAVIIVISLFGNSLVCQVFVKHKETKKSTGLLIFNLAISDILIILLNSPFALARFLSGQW 138

  Fly   136 PFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPLTVFTAVMIWILAILLGM 200
            .|.|.||.:|.|.:..|:.||..||.|::.:|:..|::|::...|...::|...:||.:|:.|.:
  Rat   139 VFGRIMCHVSRFAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHSQSLFVVGVIWSIAVFLAL 203

  Fly   201 PSVLFSDIKSYPVFTATGNMTIEV---CSP-FRDPE--YAKFMVAGKALVYYLLPLSIIGALYIM 259
            |..::.::     ||.. ||..:|   |.| |..|.  .:|::..|..::.|:|||.:|...|..
  Rat   204 PHAIYQNL-----FTLV-NMDGDVRSYCLPSFPGPSTLVSKYVDLGTFILLYILPLLVIVGTYSH 262

  Fly   260 MAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVF------------- 311
            :.|||.:  :|..|:..:.|.....:.|....||::..|:||.:|:||.:.:             
  Rat   263 LGKRLWI--QNAIGDASARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLNFYVVLISSAGVENDS 325

  Fly   312 ELWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYC 353
            .::|.|:          |       |..|  ::|.||. :||
  Rat   326 VIFYAFH----------W-------FAMS--STCYNPF-IYC 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 81/302 (27%)
TM helix 1 71..97 CDD:320593 6/25 (24%)
TM helix 2 104..130 CDD:320593 9/25 (36%)
TM helix 3 142..172 CDD:320593 10/29 (34%)
TM helix 4 182..202 CDD:320593 5/19 (26%)
TM helix 5 234..259 CDD:320593 8/24 (33%)
TM helix 6 285..315 CDD:320593 9/42 (21%)
TM helix 7 330..355 CDD:320593 7/24 (29%)
Pgr15lNP_001100053.1 7tmA_GPR83 73..357 CDD:320511 81/302 (27%)
TM helix 1 74..100 CDD:320511 6/25 (24%)
TM helix 2 107..132 CDD:320511 9/24 (38%)
TM helix 3 145..175 CDD:320511 10/29 (34%)
TM helix 4 186..207 CDD:320511 6/20 (30%)
TM helix 5 237..266 CDD:320511 8/28 (29%)
TM helix 6 286..316 CDD:320511 9/29 (31%)
TM helix 7 325..350 CDD:320511 10/43 (23%)

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