DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa2-R and GRPR

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_005305.1 Gene:GRPR / 2925 HGNCID:4609 Length:384 Species:Homo sapiens


Alignment Length:377 Identity:141/377 - (37%)
Similarity:204/377 - (54%) Gaps:41/377 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LALDMGH----NASADGGIVPYVPVLDRPE-TYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRN 102
            |.|::.|    |.|:....:|.......|. .|::..:|.:|.::|::||.||:.||...:||||
Human     9 LNLEVDHFMHCNISSHSADLPVNDDWSHPGILYVIPAVYGVIILIGLIGNITLIKIFCTVKSMRN 73

  Fly   103 IPNTYILSLALADLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGER 167
            :||.:|.||||.|||:::.|.||....|..:.|.|.|..|::..|.:..|:|||||||||||.:|
Human    74 VPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGCKLIPFIQLTSVGVSVFTLTALSADR 138

  Fly   168 YCAIVNP--------LRKLQTKPLTVFTAVMIWILAILLGMPSVLFSDIKSYPVFTATGNMTIEV 224
            |.|||.|        |.|:..|      |..|||:::||.:|..:|||:  :|....:.|.|...
Human   139 YKAIVRPMDIQASHALMKICLK------AAFIWIISMLLAIPEAVFSDL--HPFHEESTNQTFIS 195

  Fly   225 CSPF--RDPEYAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARAR 287
            |:|:  .:..:.|.......||:|::|||||...|..:||.|..||.|:|.| .::..:.|..:|
Human   196 CAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFIAKNLIQSAYNLPVE-GNIHVKKQIESR 259

  Fly   288 LHVARMVVAFVVVFFICFFPYHVFELW--YHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVA 350
            ..:|:.|:.||.:|..|:.|.||..|:  ||:   :|.|......|..|.....:|.||||||.|
Human   260 KRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHY---SEVDTSMLHFVTSICARLLAFTNSCVNPFA 321

  Fly   351 LYCVSGVFRQHFN-RYLCCICVKRQPHL--RQHSTATGMMDNTSVMSMRRST 399
            ||.:|..||:.|| :.|||     ||.|  |.|||..    :|:.|:..:||
Human   322 LYLLSKSFRKQFNTQLLCC-----QPGLIIRSHSTGR----STTCMTSLKST 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 118/303 (39%)
TM helix 1 71..97 CDD:320593 9/25 (36%)
TM helix 2 104..130 CDD:320593 13/25 (52%)
TM helix 3 142..172 CDD:320593 17/29 (59%)
TM helix 4 182..202 CDD:320593 6/19 (32%)
TM helix 5 234..259 CDD:320593 10/24 (42%)
TM helix 6 285..315 CDD:320593 11/31 (35%)
TM helix 7 330..355 CDD:320593 12/24 (50%)
GRPRNP_005305.1 7tmA_GRPR 41..333 CDD:320252 118/303 (39%)
TM helix 1 42..68 CDD:320252 9/25 (36%)
TM helix 2 75..101 CDD:320252 13/25 (52%)
TM helix 3 113..143 CDD:320252 17/29 (59%)
TM helix 4 155..175 CDD:320252 8/25 (32%)
TM helix 5 207..232 CDD:320252 10/24 (42%)
TM helix 6 257..287 CDD:320252 11/29 (38%)
TM helix 7 301..326 CDD:320252 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 177 1.000 Domainoid score I3598
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I3601
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153238at2759
OrthoFinder 1 1.000 - - FOG0001846
OrthoInspector 1 1.000 - - mtm8658
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4897
SonicParanoid 1 1.000 - - X1046
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1111.060

Return to query results.
Submit another query.