DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and GPR39

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001499.1 Gene:GPR39 / 2863 HGNCID:4496 Length:453 Species:Homo sapiens


Alignment Length:390 Identity:96/390 - (24%)
Similarity:175/390 - (44%) Gaps:76/390 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PYVP------VLDR---PETYIVT-------VLYTLIFIVGVLGNGTLV---IIFFRHRSMRNIP 104
            |.:|      ::|.   ||..:.|       ::|.:||::|:|||...:   .:..:...::...
Human     4 PSLPGSDCSQIIDHSHVPEFEVATWIKITLILVYLIIFVMGLLGNSATIRVTQVLQKKGYLQKEV 68

  Fly   105 NTYILSLALADLLVILVCVPVA--TIVY---TQESWPFERNMCRISEF-FKDISIGVSVFTLTAL 163
            ..:::|||.:|:||.|:.:|:.  :|::   |..|:...   |::..| |:..|....:..|| |
Human    69 TDHMVSLACSDILVFLIGMPMEFYSIIWNPLTTSSYTLS---CKLHTFLFEACSYATLLHVLT-L 129

  Fly   164 SGERYCAIVNPLR-KLQTKPLTVFTAV-MIWILAILLGMPSVLFSDIKSYPVFTA---------- 216
            |.|||.||.:|.| |..:.|..|...: .:|:.:.|:.:| :||:....||:...          
Human   130 SFERYIAICHPFRYKAVSGPCQVKLLIGFVWVTSALVALP-LLFAMGTEYPLVNVPSHRGLTCNR 193

  Fly   217 ----------TGNMTIEVCSPFRDPEYAKFM--VAGKALVYYLLPLSIIGALYIMMAKRLHMSAR 269
                      |.||:|  |:.. ...:..|.  :.|..:||.::.||:....:.||...:.....
Human   194 SSTRHHEQPETSNMSI--CTNL-SSRWTVFQSSIFGAFVVYLVVLLSVAFMCWNMMQVLMKSQKG 255

  Fly   270 NMPG--------EQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFYPTAEEDFD 326
            ::.|        :.:|.:|||..|..:...|::   ||...:|:.|..:..:.....|..:....
Human   256 SLAGGTRPPQLRKSESEESRTARRQTIIFLRLI---VVTLAVCWMPNQIRRIMAAAKPKHDWTRS 317

  Fly   327 EFWNVLRIVGFCTSF--LNSCVNPVALYCVSG-VFRQHFNRYLCC-ICVKRQPH---LRQHSTAT 384
            .|...:.::.|..:|  |:|.:||: ||.||. .||:.|.:.||| :.::...|   ||.|:.:|
Human   318 YFRAYMILLPFSETFFYLSSVINPL-LYTVSSQQFRRVFVQVLCCRLSLQHANHEKRLRVHAHST 381

  Fly   385  384
            Human   382  381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 82/342 (24%)
TM helix 1 71..97 CDD:320593 8/35 (23%)
TM helix 2 104..130 CDD:320593 9/27 (33%)
TM helix 3 142..172 CDD:320593 12/30 (40%)
TM helix 4 182..202 CDD:320593 4/20 (20%)
TM helix 5 234..259 CDD:320593 6/26 (23%)
TM helix 6 285..315 CDD:320593 6/29 (21%)
TM helix 7 330..355 CDD:320593 8/26 (31%)
GPR39NP_001499.1 7tmA_GPR39 31..355 CDD:320263 81/335 (24%)
TM helix 1 31..58 CDD:320263 7/26 (27%)
TM helix 2 68..94 CDD:320263 8/25 (32%)
TM helix 3 108..138 CDD:320263 12/30 (40%)
TM helix 4 150..172 CDD:320263 4/22 (18%)
TM helix 5 217..246 CDD:320263 6/28 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..274 2/18 (11%)
TM helix 6 276..306 CDD:320263 7/32 (22%)
TM helix 7 323..348 CDD:320263 9/25 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..453
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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