DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and Grpr

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_036838.1 Gene:Grpr / 24938 RGDID:2750 Length:384 Species:Rattus norvegicus


Alignment Length:356 Identity:135/356 - (37%)
Similarity:197/356 - (55%) Gaps:36/356 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQES 134
            |::..:|.||.::|::||.||:.||...:||||:||.:|.||||.|||:::.|.||....|..:.
  Rat    42 YVIPAVYGLIIVIGLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLVTCAPVDASKYLADR 106

  Fly   135 WPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNP--------LRKLQTKPLTVFTAVMI 191
            |.|.|..|::..|.:..|:|||||||||||.:||.|||.|        |.|:..|      |.:|
  Rat   107 WLFGRIGCKLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLK------AALI 165

  Fly   192 WILAILLGMPSVLFSDIKSYPVFTATGNMTIEVCSPF--RDPEYAKFMVAGKALVYYLLPLSIIG 254
            ||:::||.:|..:|||:  :|......|.|...|:|:  .:..:.|.......||:|::|||||.
  Rat   166 WIVSMLLAIPEAVFSDL--HPFHVKDTNQTFISCAPYPHSNELHPKIHSMASFLVFYIIPLSIIS 228

  Fly   255 ALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELW--YHF 317
            ..|..:|:.|..||.|:|.| .::..:.|..:|..:|:.|:.||.:|..|:.|.||..|:  ||:
  Rat   229 VYYYFIARNLIQSAYNLPVE-GNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHY 292

  Fly   318 YPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHFN-RYLCCICVKRQPHLRQHS 381
               :|.|......:..|.....:|.||||||.|||.:|..||:.|| :.|||     ||.|...|
  Rat   293 ---SEVDTSMLHFITSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCC-----QPSLLNRS 349

  Fly   382 TATGMMDNTSVMSMRRSTYVGGT----AGNL 408
            .:||.  :|:.|:..:||....|    .||:
  Rat   350 HSTGR--STTCMTSFKSTNPSATFSLINGNI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 117/303 (39%)
TM helix 1 71..97 CDD:320593 10/25 (40%)
TM helix 2 104..130 CDD:320593 13/25 (52%)
TM helix 3 142..172 CDD:320593 17/29 (59%)
TM helix 4 182..202 CDD:320593 6/19 (32%)
TM helix 5 234..259 CDD:320593 10/24 (42%)
TM helix 6 285..315 CDD:320593 11/31 (35%)
TM helix 7 330..355 CDD:320593 11/24 (46%)
GrprNP_036838.1 7tm_1 58..321 CDD:278431 105/274 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 177 1.000 Domainoid score I3490
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3481
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153238at2759
OrthoFinder 1 1.000 - - FOG0001846
OrthoInspector 1 1.000 - - mtm9138
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45695
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1046
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1111.030

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