DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and Oprd1

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_036749.1 Gene:Oprd1 / 24613 RGDID:3233 Length:372 Species:Rattus norvegicus


Alignment Length:404 Identity:97/404 - (24%)
Similarity:167/404 - (41%) Gaps:85/404 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YASLMDVGQTLAARLADSDGNGANDSGLLATGQGLEQEQEGLALDMGHNASADGGIVPYVPVLDR 66
            ::.|.:|..|..:....:..|.:...|        .:....|||.:.                  
  Rat    13 FSLLANVSDTFPSAFPSASANASGSPG--------ARSASSLALAIA------------------ 51

  Fly    67 PETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYT 131
                 :|.||:.:..||:|||..::....|:..::...|.||.:|||||.|.... :|..:..|.
  Rat    52 -----ITALYSAVCAVGLLGNVLVMFGIVRYTKLKTATNIYIFNLALADALATST-LPFQSAKYL 110

  Fly   132 QESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKL--QTKPLTVFTAVMIWIL 194
            .|:|||...:|:........::..|:||||.:|.:||.|:.:|::.|  :|........:.||:|
  Rat   111 METWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVL 175

  Fly   195 AILLGMPSVLFSDIKSYPVFTATGNMTIEVCSPFRDPEY-----AKFMVAGKALVYYLLPLSIIG 254
            |..:|:|.::.:       .|...:..:.....|..|.:     .|..|   .|..:::|:.||.
  Rat   176 ASGVGVPIMVMA-------VTQPRDGAVVCTLQFPSPSWYWDTVTKICV---FLFAFVVPILIIT 230

  Fly   255 ALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFYP 319
            ..|.:|..||. |.|.:.|      |:.:.|:...:.|||:..|..|.:|:.|.|:|.:      
  Rat   231 VCYGLMLLRLR-SVRLLSG------SKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVI------ 282

  Fly   320 TAEEDFDEFWNVLRI----------VGFCTS--FLNSCVNPVALYCVSGVFRQHFNRYLC-CICV 371
                    .|.::.|          :..|.:  :.||.:|||....:...|::.| |.|| ..|.
  Rat   283 --------VWTLVDINRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCF-RQLCRAPCG 338

  Fly   372 KRQP-HLRQHSTAT 384
            .::| .||:...||
  Rat   339 GQEPGSLRRPRQAT 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 79/310 (25%)
TM helix 1 71..97 CDD:320593 8/25 (32%)
TM helix 2 104..130 CDD:320593 10/25 (40%)
TM helix 3 142..172 CDD:320593 10/29 (34%)
TM helix 4 182..202 CDD:320593 5/19 (26%)
TM helix 5 234..259 CDD:320593 7/24 (29%)
TM helix 6 285..315 CDD:320593 10/29 (34%)
TM helix 7 330..355 CDD:320593 7/36 (19%)
Oprd1NP_036749.1 7tmA_Delta_opioid_R 50..329 CDD:320217 79/333 (24%)
TM helix 1 51..77 CDD:320217 8/48 (17%)
TM helix 2 84..110 CDD:320217 10/26 (38%)
TM helix 3 121..151 CDD:320217 10/29 (34%)
TM helix 4 163..185 CDD:320217 6/21 (29%)
TM helix 5 209..239 CDD:320217 8/32 (25%)
TM helix 6 258..284 CDD:320217 9/39 (23%)
TM helix 7 297..322 CDD:320217 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..372 5/13 (38%)

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