DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and Tacr1

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_033339.2 Gene:Tacr1 / 21336 MGIID:98475 Length:407 Species:Mus musculus


Alignment Length:358 Identity:93/358 - (25%)
Similarity:167/358 - (46%) Gaps:42/358 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RPETYIV--TVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCV----P 124
            :|...||  ...||:|.:..|:||..::.|...|:.||.:.|.::::||.|:     .|:    .
Mouse    27 QPTWQIVLWAAAYTVIVVTSVVGNVVVIWIILAHKRMRTVTNYFLVNLAFAE-----ACMAAFNT 86

  Fly   125 VATIVYTQES-WPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKLQTKPLTVFTA 188
            |....|...: |.:....|:...||...::..|::::||::.:||.||::||:...:...|....
Mouse    87 VVNFTYAVHNVWYYGLFYCKFHNFFPIAALFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVI 151

  Fly   189 VMIWILAILLGMPSVLFSDIKSYPVFTATGNMTIEVC------SPFRDPEYAKFMVAGKALVYYL 247
            .:||:||:||..|...:|..::.|        :..||      .|.|..|.| :.:....|:|: 
Mouse   152 FVIWVLALLLAFPQGYYSTTETMP--------SRVVCMIEWPEHPNRTYEKA-YHICVTVLIYF- 206

  Fly   248 LPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFE 312
            |||.:||..|.::.  :.:.|..:||: .|.:...|..|:..|.:|::..|..|.||:.|:|:|.
Mouse   207 LPLLVIGYAYTVVG--ITLWASEIPGD-SSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFF 268

  Fly   313 LWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHF-NRYLCCICVKRQPH 376
            |..:..|  :....:|...:.:.....:..::..||:...|::..||..| :.:.||..:....:
Mouse   269 LLPYINP--DLYLKKFIQQVYLASMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDY 331

  Fly   377 --LRQHSTATGMMDNTSVMSMRR-----STYVG 402
              |...||.. :...:||..:.|     ||.||
Mouse   332 EGLEMKSTRY-LQTQSSVYKVSRLETTISTVVG 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 79/304 (26%)
TM helix 1 71..97 CDD:320593 9/27 (33%)
TM helix 2 104..130 CDD:320593 6/29 (21%)
TM helix 3 142..172 CDD:320593 9/29 (31%)
TM helix 4 182..202 CDD:320593 7/19 (37%)
TM helix 5 234..259 CDD:320593 9/24 (38%)
TM helix 6 285..315 CDD:320593 11/29 (38%)
TM helix 7 330..355 CDD:320593 3/24 (13%)
Tacr1NP_033339.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
7tm_GPCRs 33..316 CDD:391938 78/302 (26%)
TM helix 1 35..59 CDD:341315 7/23 (30%)
TM helix 2 68..90 CDD:341315 6/26 (23%)
TM helix 3 106..128 CDD:341315 5/21 (24%)
TM helix 4 149..165 CDD:341315 6/15 (40%)
TM helix 5 194..217 CDD:341315 8/24 (33%)
TM helix 6 244..269 CDD:341315 9/24 (38%)
TM helix 7 284..309 CDD:341315 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..407 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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