DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and Ntsr1

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_061236.1 Gene:Ntsr1 / 18216 MGIID:97386 Length:424 Species:Mus musculus


Alignment Length:410 Identity:103/410 - (25%)
Similarity:183/410 - (44%) Gaps:55/410 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLEQEQEGLALDMGHNASADGGIVPYVPVLDRPETY---IVTVLYTLIFIVGVLGNGTLVIIFFR 96
            |||.....|:|..|...|::..:.|...:....:.|   :||.:|..:|:||.:||........|
Mouse    26 GLETMLLALSLSNGSGNSSESILEPNSNLDVNTDIYSKVLVTAVYLALFVVGTVGNSVTAFTLAR 90

  Fly    97 HRSMRNIPNT---YILSLALADLLVILVCVPVA--TIVYTQESWPFERNMCRISEFFKDISIGVS 156
            .:|::::.:|   ::.||||:|||::|:.:||.  ..::....|.|....||...|.:|.....:
Mouse    91 KKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYAT 155

  Fly   157 VFTLTALSGERYCAIVNPL--RKLQTKPLTVFTAVMIWILAILLGMPSVLFSDIKS------YPV 213
            ...:.:||.|||.||.:|.  :.|.::..|......||:.:.||.:|.:....:::      :| 
Mouse   156 ALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAVPMLFTMGLQNRSADGQHP- 219

  Fly   214 FTATGNMTIEVCSPFRDPEYAKFMVAGKALVYYLLPLSIIGALYIMMAKRL----HMSARN---- 270
                |.:   ||:|..|....|.::.....:.:|.|:.||..|..::|.:|    |.:|..    
Mouse   220 ----GGL---VCTPTVDTATVKVVIQVNTFMSFLFPMLIISILNTVIANKLTVMVHQAAEQGRGV 277

  Fly   271 -MPGEQQSMQSRT--------QARARLHVARMVVAFVVVFFICFFPYHVFELWYHF-----YPTA 321
             ..|...|::..|        :.:|..|...::.|.|:.|.:|:.||||..|.:.:     :.|.
Mouse   278 CTVGTHNSLEHSTFNMSIEPGRVQALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTF 342

  Fly   322 EEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHFNRYLCCICV------KRQPHLRQH 380
            ..||..::.:|....|   :::|.:||:....||..|||.|...|.|:|.      |::|...:.
Mouse   343 LFDFYHYFYMLTNALF---YVSSAINPILYNLVSANFRQVFLSTLACLCPGWRRRRKKRPTFSRK 404

  Fly   381 STATGMMDNTSVMSMRRSTY 400
            ..:.......|..:.|.:.|
Mouse   405 PNSMSSNHAFSTSATRETLY 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 86/329 (26%)
TM helix 1 71..97 CDD:320593 8/25 (32%)
TM helix 2 104..130 CDD:320593 11/30 (37%)
TM helix 3 142..172 CDD:320593 10/29 (34%)
TM helix 4 182..202 CDD:320593 5/19 (26%)
TM helix 5 234..259 CDD:320593 6/24 (25%)
TM helix 6 285..315 CDD:320593 11/29 (38%)
TM helix 7 330..355 CDD:320593 5/24 (21%)
Ntsr1NP_061236.1 7tm_1 80..369 CDD:278431 74/299 (25%)
Neurotensin binding. /evidence=ECO:0000250 326..349 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..424 3/25 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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