DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and npr-34

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_497057.2 Gene:npr-34 / 175131 WormBaseID:WBGene00013187 Length:613 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593
TM helix 1 71..97 CDD:320593
TM helix 2 104..130 CDD:320593
TM helix 3 142..172 CDD:320593
TM helix 4 182..202 CDD:320593
TM helix 5 234..259 CDD:320593
TM helix 6 285..315 CDD:320593
TM helix 7 330..355 CDD:320593
npr-34NP_497057.2 7tmA_GPRnna14-like 75..414 CDD:320132
TM helix 1 75..99 CDD:320132
TM helix 2 108..130 CDD:320132
TM helix 3 146..168 CDD:320132
TM helix 4 191..207 CDD:320132
TM helix 5 245..268 CDD:320132
TM helix 6 340..365 CDD:320132
TM helix 7 382..407 CDD:320132
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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