DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and LOC1278242

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_061514593.1 Gene:LOC1278242 / 1278242 VectorBaseID:AGAMI1_002097 Length:472 Species:Anopheles gambiae


Alignment Length:398 Identity:197/398 - (49%)
Similarity:254/398 - (63%) Gaps:36/398 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NASADGGIVPYVPVLDRPETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALA 114
            ||||..  .||.|...|||||||.:|:..|||:||||||||:|:|.|||:|||:|||||||||||
Mosquito    77 NASATE--TPYTPYELRPETYIVPILFAAIFIIGVLGNGTLIIVFLRHRAMRNVPNTYILSLALA 139

  Fly   115 DLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKL- 178
            |||:|:..||..:|:||.:|||:...:|..|||.||:|||||||||.||||:|:.|||:||||. 
Mosquito   140 DLLLIVTTVPFTSIIYTLDSWPWGSLLCTSSEFIKDVSIGVSVFTLVALSGDRFFAIVDPLRKFH 204

  Fly   179 -----------QTKPLTVFTAVMIWILAILLGMPSVLFSDIKSYPVFTATGNMTIEVCSPFRD-- 230
                       :...:|:.|||:||:|||...:|:::.|.||:..|   ..:::...|.||.|  
Mosquito   205 AHVDPFLGGGRRATRMTITTAVLIWLLAIAFAVPAIVGSHIKTVVV---NKDVSFYFCYPFPDEW 266

  Fly   231 -PEYAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMV 294
             .:||:.||.||.||||.:||.|||..|.::|:.|..||:::|||.|.  :..|.:||..||..|
Mosquito   267 GSQYARGMVLGKFLVYYAVPLFIIGIFYALIARHLIHSAKHVPGEMQG--TVRQIKARRKVAITV 329

  Fly   295 VAFVVVFFICFFPYHVFELWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFR 359
            :||||:|.|||.|.|:|.||:::.|...||::.||:||||||||.||.|||.||||||||||.||
Mosquito   330 LAFVVIFGICFLPSHLFMLWFYYNPNFNEDYNGFWHVLRIVGFCLSFANSCANPVALYCVSGAFR 394

  Fly   360 QHFNRYLCCICVKRQPHLRQHSTATGMMDN--TSVMSMRRSTYVGGTAGNLRASLHR-------N 415
            :||||||  :|.......|:|.......|.  ||.||.|   |......:||.::..       |
Mosquito   395 KHFNRYL--LCDGSSNSRRRHGDNLAPRDTSLTSTMSRR---YTSKRMQSLRINIQETTIVMIPN 454

  Fly   416 SNHGVGGA 423
            .|....||
Mosquito   455 GNSKSDGA 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 164/306 (54%)
TM helix 1 71..97 CDD:320593 16/25 (64%)
TM helix 2 104..130 CDD:320593 18/25 (72%)
TM helix 3 142..172 CDD:320593 21/29 (72%)
TM helix 4 182..202 CDD:320593 9/19 (47%)
TM helix 5 234..259 CDD:320593 15/24 (63%)
TM helix 6 285..315 CDD:320593 17/29 (59%)
TM helix 7 330..355 CDD:320593 20/24 (83%)
LOC1278242XP_061514593.1 None

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