DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and LOC101733812

DIOPT Version :9

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_017947162.2 Gene:LOC101733812 / 101733812 -ID:- Length:344 Species:Xenopus tropicalis


Alignment Length:317 Identity:83/317 - (26%)
Similarity:140/317 - (44%) Gaps:45/317 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LDRPETY-----IVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCV 123
            |..||.:     :|.:.|.:|||||:|||..:||........::|.|.||::||:|||..:....
 Frog    31 LSMPEDFEFLYVLVPIFYIIIFIVGILGNMIIVIGLTCLLQSKSIANIYIVNLAIADLSFVATLP 95

  Fly   124 PVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLRKL--QTKPLTVF 186
            ..|..:..:..|.|...||:.......:::..|:|.||.||.:||..||:|::.|  :|:.....
 Frog    96 LWAVSMAAKYQWTFGSFMCKFCATMSSVNMYSSIFLLTCLSIDRYFGIVHPMKSLNWRTQAKAKI 160

  Fly   187 TAVMIWILAILLGMPSVLFSDI---KSYPVFTATGNMTIEVCS---PFRDPEYAKFMVAGKALVY 245
            ...::||.|.....|::.|...   |.:.:.|         |:   |.....:..|:...|.:..
 Frog   161 ATFIVWISACATSFPTMYFRQTYYSKKHQIIT---------CAMKYPKHGVFWPNFVDLMKNIFG 216

  Fly   246 YLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHV 310
            :::|..:.|..|.::.|.:..|.:|...:.:|.:          |.::|:|.|..|.:|:.|:.:
 Frog   217 FVIPFIVQGVCYCLIYKNMLASRKNRVKKSRSDK----------VLKVVLAMVFAFLVCWLPFQI 271

  Fly   311 FEL--------WYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFR 359
            ...        |......|     |..|.:..|..|.:|.||||||:..:..|..||
 Frog   272 ASFLKVLIRMHWIRDCKAA-----EIINAVMPVTVCIAFSNSCVNPILYFFASKRFR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 80/311 (26%)
TM helix 1 71..97 CDD:320593 12/25 (48%)
TM helix 2 104..130 CDD:320593 9/25 (36%)
TM helix 3 142..172 CDD:320593 9/29 (31%)
TM helix 4 182..202 CDD:320593 3/19 (16%)
TM helix 5 234..259 CDD:320593 5/24 (21%)
TM helix 6 285..315 CDD:320593 7/37 (19%)
TM helix 7 330..355 CDD:320593 10/24 (42%)
LOC101733812XP_017947162.2 7tm_GPCRs 42..326 CDD:421689 80/306 (26%)
TM helix 1 43..69 CDD:410628 12/25 (48%)
TM helix 2 76..101 CDD:410628 9/24 (38%)
TM helix 3 114..144 CDD:410628 9/29 (31%)
TM helix 4 157..178 CDD:410628 4/20 (20%)
TM helix 5 205..234 CDD:410628 5/28 (18%)
TM helix 6 246..276 CDD:410628 8/39 (21%)
TM helix 7 294..319 CDD:410628 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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