DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa2-R and npy2r

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_004911210.1 Gene:npy2r / 100498351 XenbaseID:XB-GENE-983413 Length:408 Species:Xenopus tropicalis


Alignment Length:370 Identity:101/370 - (27%)
Similarity:176/370 - (47%) Gaps:52/370 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SDGNGANDSGLLATGQGLEQEQEGLALDMGHNASADGGIVPYVPVLDRPETYIVTVL-------- 75
            |..|.:...|.:|:.:. |...|.:..:|.....|.|...||.. |.:||...:|.|        
 Frog    15 SSQNCSIKMGRIASEKN-ENRTEDIKTEMNTWFYAAGLTTPYND-LTKPELIDITKLLSVQVVLI 77

  Fly    76 --YTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYT-QESWPF 137
              |:.|.::|||||..::.:..:.::||.:.|.:|::||::||:|..:|:|. |:||| .:.|.|
 Frog    78 LAYSSIILLGVLGNSLVIYVVIKFKTMRTVTNFFIVNLAVSDLMVNTLCLPF-TLVYTLLDDWKF 141

  Fly   138 ERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPLR-KLQTKPLTVFTAVMIWILAILLGMP 201
            ...:|.:..:.:.:::.||..||..::.:|:..||..|. |:.||...:...: .|:.:.||..|
 Frog   142 GTVLCHLVTYSQGLAVQVSTVTLMVIALDRHRCIVYHLESKISTKICFMIIGI-TWVCSALLASP 205

  Fly   202 SVLFSDIKSYPVFTATGNMTIEVCS---PFRDPEYAKFMVAGKALVYYLLPLSIIGALYIMMAKR 263
            ..:|   |.|.|...:.:..|:.||   |..|..|.........|:.|::||:||...||.:..:
 Frog   206 LAIF---KEYSVIVISSDFQIQACSERWPVGDLNYGTIYSISMLLIQYIVPLAIISYAYIRIWTK 267

  Fly   264 L--HMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFELWYHFYPTAEE--- 323
            |  |:|...  |.....|.|.:      ..:|:||.||||.:|:.|:|.|:|       |.:   
 Frog   268 LKNHVSPGG--GNDHYHQRRRK------TTKMLVAVVVVFAVCWLPFHAFQL-------ASDIDG 317

  Fly   324 ---DFDEF---WNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHF 362
               |.:|:   :.:..::..|::|    .||:....::..:|..|
 Frog   318 KVLDLNEYKLIYTIFHVIAMCSTF----ANPLLYGWMNNNYRTAF 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 86/317 (27%)
TM helix 1 71..97 CDD:320593 9/35 (26%)
TM helix 2 104..130 CDD:320593 10/25 (40%)
TM helix 3 142..172 CDD:320593 6/29 (21%)
TM helix 4 182..202 CDD:320593 3/19 (16%)
TM helix 5 234..259 CDD:320593 7/24 (29%)
TM helix 6 285..315 CDD:320593 12/29 (41%)
TM helix 7 330..355 CDD:320593 4/24 (17%)
npy2rXP_004911210.1 7tmA_NPY2R 74..358 CDD:320521 84/307 (27%)
TM helix 1 75..101 CDD:320521 7/25 (28%)
TM helix 2 108..133 CDD:320521 10/25 (40%)
TM helix 3 146..176 CDD:320521 6/29 (21%)
TM helix 4 187..208 CDD:320521 4/21 (19%)
TM helix 5 238..267 CDD:320521 8/28 (29%)
TM helix 6 283..313 CDD:320521 14/42 (33%)
TM helix 7 326..351 CDD:320521 4/28 (14%)

Return to query results.
Submit another query.