DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and galr3

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_004913937.2 Gene:galr3 / 100488248 XenbaseID:XB-GENE-5872135 Length:422 Species:Xenopus tropicalis


Alignment Length:425 Identity:118/425 - (27%)
Similarity:196/425 - (46%) Gaps:72/425 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LEQEQEG--------------LALDMGH--NASAD-----GGIVPYVPVLDRPETYIVTVLYTLI 79
            ||:|::|              |..:|..  |:|..     |||             ||.|:::||
 Frog    14 LEKERDGRSAAAYTRVGVVILLVAEMSQAWNSSVSSELPPGGI-------------IVPVVFSLI 65

  Fly    80 FIVGVLGNGTLVIIFFRH-RSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESWPFERNMCR 143
            |.:|.:|||.::.:..|: ::..|..|.:||:|.:|||..||:|||....:||.:.|.|...:|:
 Frog    66 FALGTVGNGLVLAVLLRNGQTKYNTTNLFILNLGVADLCFILLCVPFQATIYTLDGWLFGAFLCK 130

  Fly   144 ISEFFKDISIGVSVFTLTALSGERYCAIVNPL--RKLQTKPLTVFTAVMIWILAILLGMPSVLFS 206
            ...|...:|:..|.|||.|:|.:||.||..||  |.|:|....:....:||.|:||...|.:.:.
 Frog   131 AVHFSIYLSMYASSFTLAAVSVDRYLAIRYPLKSRDLRTSRNALAAIGVIWALSILFAGPYLSYY 195

  Fly   207 DIKSYPVFTATGNMTIEVCSPFRDPEYAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHMSARNM 271
            .|..|        ..:.:|.|..:....|.|.....:..||||:.|:|..|   |:.:.....::
 Frog   196 HIILY--------NQVPICIPNWEDRRRKIMDVSTFVFGYLLPVLILGLSY---ARTICFLWTSV 249

  Fly   272 PGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYHVFEL--WYHFYPTAEEDFDEFWNVLRI 334
            ...:.:.:||   :|:..|.:|::...|:|.||:.|:|:..|  |:..:|     |::.....|:
 Frog   250 DPVKTASESR---KAKHKVTKMIIIVAVLFCICWLPHHLVILCFWFGHFP-----FNKATYAFRL 306

  Fly   335 VGFCTSFLNSCVNPVALYCVSGVFRQHFNRYLCCICVKRQPHLRQHSTATGMMDNTSVMSMRRST 399
            |..|.|:.|||:||:....:|..||:.|.:...|:..:::...:.|:....            :|
 Frog   307 VSHCMSYANSCLNPIVYALISKHFRKRFKQVFTCLLTQKRARNKVHAVQAA------------NT 359

  Fly   400 YVGGTAGNLRAS-LHRNSNHGVGGAGGGVGGGVGS 433
            ..|..||:...: :..:|..| |.|....|...||
 Frog   360 IAGFYAGHTEVTQVQEDSGRG-GRAAREEGADSGS 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 93/296 (31%)
TM helix 1 71..97 CDD:320593 10/25 (40%)
TM helix 2 104..130 CDD:320593 12/25 (48%)
TM helix 3 142..172 CDD:320593 12/29 (41%)
TM helix 4 182..202 CDD:320593 5/19 (26%)
TM helix 5 234..259 CDD:320593 9/24 (38%)
TM helix 6 285..315 CDD:320593 10/31 (32%)
TM helix 7 330..355 CDD:320593 9/24 (38%)
galr3XP_004913937.2 7tmA_Gal2_Gal3_R 56..334 CDD:320225 94/309 (30%)
TM helix 1 57..83 CDD:320225 10/25 (40%)
TM helix 2 91..117 CDD:320225 12/25 (48%)
TM helix 3 129..159 CDD:320225 12/29 (41%)
TM helix 4 171..191 CDD:320225 5/19 (26%)
TM helix 5 215..244 CDD:320225 10/31 (32%)
TM helix 6 260..290 CDD:320225 10/29 (34%)
TM helix 7 302..327 CDD:320225 9/24 (38%)

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