DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa2-R and gpr37

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_002941877.2 Gene:gpr37 / 100486656 XenbaseID:XB-GENE-962315 Length:603 Species:Xenopus tropicalis


Alignment Length:347 Identity:82/347 - (23%)
Similarity:150/347 - (43%) Gaps:38/347 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PYVPVL-DRPETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVC 122
            |:.|:. |....|.|..|..:||::|::||..::.|...:..||:|.|:.:.:||..|.|:|..|
 Frog   240 PFYPLTEDSYGAYAVMCLSVIIFVIGIMGNMAVMCIVCHNYYMRSISNSLLANLAFWDFLIIFFC 304

  Fly   123 VPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNP---LRKLQTKPLT 184
            :|:.......:.|..|...|:|..:.:..|:||:.|||.||..:|:.|..|.   ...::....|
 Frog   305 LPLVIFHELTKKWLLEDFSCKIIPYIEIASLGVTTFTLCALCIDRFRAATNVQMYYEMIENCTST 369

  Fly   185 VFTAVMIWILAILLGMPSVLFSDIKSYPVFTATG--------NMTIEVCSPFRDPEYAKFMVAGK 241
            .....:||:.|::|.:|.|:...:.    ...||        ...:::.:...|..|...:....
 Frog   370 TAKLAVIWVGALVLALPEVVLRQLS----VEDTGVNGRFLRERCVVKISTELPDTIYVLALTYDG 430

  Fly   242 ALV------YYLLPLSIIGALYIMMAKRLHMSARNMP-GEQQSMQSRTQARARLHVARMVVAFVV 299
            |.:      |:.||........::.|:::..:.:... |.::.:|...|...      .|||..:
 Frog   431 ARLWWYFGCYFCLPTLFTITCSLVTARKIKRAEKACTRGNKRQIQLEGQMNC------TVVALTI 489

  Fly   300 VFFICFFPYHVFEL--WYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQHF 362
            ::..|..|.::..:  .|.....:.:..|    :|.::.....|..|||.||.|:|:...|.:.|
 Frog   490 LYGFCVIPENICNIVAAYMSSGVSRQTLD----LLHLISQFLLFFKSCVTPVLLFCLCKPFSRAF 550

  Fly   363 NRYLCCICVKRQPHLRQHSTAT 384
            ....||.|   ...:::.||||
 Frog   551 MECCCCCC---DECIQKSSTAT 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 71/311 (23%)
TM helix 1 71..97 CDD:320593 8/25 (32%)
TM helix 2 104..130 CDD:320593 8/25 (32%)
TM helix 3 142..172 CDD:320593 12/29 (41%)
TM helix 4 182..202 CDD:320593 5/19 (26%)
TM helix 5 234..259 CDD:320593 4/30 (13%)
TM helix 6 285..315 CDD:320593 5/31 (16%)
TM helix 7 330..355 CDD:320593 9/24 (38%)
gpr37XP_002941877.2 7tmA_GPR37 252..550 CDD:320255 71/311 (23%)
TM helix 1 253..279 CDD:320255 8/25 (32%)
TM helix 2 286..312 CDD:320255 8/25 (32%)
TM helix 3 324..354 CDD:320255 12/29 (41%)
TM helix 4 367..387 CDD:320255 5/19 (26%)
TM helix 5 429..454 CDD:320255 4/24 (17%)
TM helix 6 475..505 CDD:320255 7/35 (20%)
TM helix 7 518..543 CDD:320255 10/28 (36%)

Return to query results.
Submit another query.