DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCHa2-R and cckbrb

DIOPT Version :10

Sequence 1:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster
Sequence 2:XP_017213239.2 Gene:cckbrb / 100331465 ZFINID:ZDB-GENE-201012-1 Length:442 Species:Danio rerio


Alignment Length:448 Identity:113/448 - (25%)
Similarity:195/448 - (43%) Gaps:92/448 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NDSGL-----LATGQGLEQEQEGLALDMGHNASADGGIVPYV-PVLDRPETYIVTVLYTLIFIVG 83
            ||:|:     |.....|.:...| :|::.:....|..::|.: |...:....:..:||.|||::.
Zfish     7 NDTGIWACLQLHNASILNRSSNG-SLEVPNGTCEDALLLPKIEPARAKEMDSLRILLYCLIFLLS 70

  Fly    84 VLGNGTLVIIFFRHRSMRNIPNTYILSLALADLLVILVCVPVATIVYTQESWPFERNMCRISEFF 148
            |.||..::::...::.||.:.|:::||||::||::.:||:|...|......:.|...||:|..:.
Zfish    71 VFGNLLIIVVLMVNKRMRTVTNSFLLSLAISDLMMAVVCMPFTLIPNLMGDFIFGAAMCKIVAYL 135

  Fly   149 KDISIGVSVFTLTALSGERYCAIVNPL--RKLQTKPLTVFTAVMIWILAILLGMPSVLFSDIKSY 211
            ..||:.:|.|:|.|::.|||.||.|||  |..||:..........|:::.|:..|..:||.:.. 
Zfish   136 MGISVCISTFSLVAIAIERYSAICNPLKSRAWQTRSHAYKVIASTWVVSFLIMTPYPIFSTLVE- 199

  Fly   212 PVFTATGNMTIEVC-SPFRDPEYAK----------FMVAGKALV--YYLLPLSIIGAL------- 256
              ||...|:|..:| ..:.:.|..|          |.:.|..::  |.|:...:...:       
Zfish   200 --FTKNNNITGHMCRHDWMNSEVEKAWCILLLFVLFFIPGVVMIIAYGLISRELYRGIQFELEQK 262

  Fly   257 ------------------------YIMMAKR---LHMSARNMPG-----EQQSMQSRTQARARLH 289
                                    ||.::||   :.|||....|     ..:|..|..:..|:..
Zfish   263 KGQCGMKNGISATVLISSDDGDGCYIQVSKRPNSMEMSALTPTGSAKVDRPRSNTSEAKLMAKKR 327

  Fly   290 VARMVVAFVVVFFICFFPYHVFELWYHF-YPTAEEDFD----EFWNVLRIVGFCTSFLNSCVNPV 349
            |.||::..|.:||||:.|.:....|..| ..:|.....    .|.::|       |:.::||||:
Zfish   328 VIRMLIVIVAMFFICWMPVYSVNTWKAFDLASAHRALSGAPISFIHLL-------SYTSACVNPI 385

  Fly   350 ALYCVSGVFRQHFNRYL-----CCICVKRQPHLRQ---HSTATG----MMDNTSVMSM 395
             :||   ...:.|.:.|     ||....|:...|:   ..||||    ..:.|:|.:|
Zfish   386 -IYC---FMNKRFRKALLATFSCCCWPCRKRGFREGDDEVTATGASMSKFNYTTVSTM 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 90/350 (26%)
TM helix 1 71..97 CDD:320593 8/25 (32%)
TM helix 2 104..130 CDD:320593 11/25 (44%)
TM helix 3 142..172 CDD:320593 12/29 (41%)
TM helix 4 182..202 CDD:320593 2/19 (11%)
TM helix 5 234..259 CDD:320593 6/67 (9%)
TM helix 6 285..315 CDD:320593 10/29 (34%)
TM helix 7 330..355 CDD:320593 8/24 (33%)
cckbrbXP_017213239.2 None

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