DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbce and PAC2

DIOPT Version :9

Sequence 1:NP_610197.2 Gene:Tbce / 35532 FlyBaseID:FBgn0033055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_010922.1 Gene:PAC2 / 856724 SGDID:S000000809 Length:518 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:126/525 - (24%)
Similarity:214/525 - (40%) Gaps:138/525 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YPLGTRIKIGDNYGTVRYVGEVSGHMGSW-----LGIEWDDGLRGKHNGIVDGKRYFQTQTPTGG 71
            |.:|.|:|||..:.|::::|.:.    .|     .|:||||..||||:|.:|...||..|.|..|
Yeast     3 YEIGDRLKIGGYFCTIKFIGVIK----PWPSVKAYGVEWDDHSRGKHSGTIDDIHYFDVQIPNSG 63

  Fly    72 SFIRPGKV-GPCA---TLEDAARERYLNYDSSNVDESLIREAQASLQASLFEVVGMDKIARKQSK 132
            ||::..|: .|..   |..:|..|:| ...|:|:::       .|:.....|.:|.|::..:...
Yeast    64 SFLKESKIKSPGVRRITFYEALSEKY-GGSSNNIND-------LSIGNKRVEGLGFDELNARNKN 120

  Fly   133 FEQLEEVSV----------DQTPVNAAGYLKELTHLTTLNVSHTLIWNWEIVASIAQQLPSLTNL 187
            :::|.::::          :|..:|..  ::...::..|::|..|..|...:....:.|.:|.:|
Yeast   121 YKKLRKIALRDSDVAILFQNQDELNRV--IQNCVNVKDLDLSLNLFTNINSLCEFIEPLKNLESL 183

  Fly   188 NLSSNRLVLPTSSQITELEPSFRQLKRINLRSCGFS---------DWKDVMHTALLWPNILSLGL 243
            |:|.|:| |.....:.|.:.|  .:|.:.|.|||.|         .::.:....|.:.|:.|.|:
Yeast   184 NISQNKL-LSGWDNLKEYDLS--HIKTLRLSSCGLSYKHIGKLLKSFRTLKMLDLSYNNLTSAGI 245

  Fly   244 Q--ENSLGQLAEVDRTKIFKQLHELDLHRTNIMDFDQVTKLGNLTTLRLLNIMENGIEEIKLPDC 306
            |  ||      |:..|     |.||::...|::.|....|  || ||:.||:..|.|        
Yeast   246 QNFEN------EIPCT-----LEELNISGNNLISFPLFPK--NL-TLKGLNVSNNQI-------- 288

  Fly   307 DSQEKLNIFVSLEQLNLLHNPIWNEADAFNELDK-LPQLKRLSKTPHLKS----------NFDEM 360
             |:.......|:|.|::..|. :.|....::|:| .|.||.:    ||..          |.:|.
Yeast   289 -SRAPSIAIYSVESLDITDNK-FKERSLIDDLNKTFPSLKNI----HLSGNEFNYNGNYINVEEQ 347

  Fly   361 --FSKAVASIASLQFINKAEVTAEQRRGAE-------------YDI----W----KKYALDWMQA 402
              |.:.:|....:..:|.:....:.||.||             ||.    |    |.|.:|.   
Yeast   348 ATFYEVLARFDRVMVLNGSICDVKTRREAEMFFVSKVMNNELSYDTNLPRWSSLIKSYEIDM--- 409

  Fly   403 TQGGTDSLREFCRRHRTYPLLV--------KKYGSPADF--VPRSQAK----------QSNLINV 447
                  |...|.....|...||        ||..|..|:  :|....:          ..:::||
Yeast   410 ------SKLSFNNERETRQSLVLKIKIRAGKKPSSDLDYWVLPSFTVRYVKSVICRKLNFDILNV 468

  Fly   448 SIRHQ 452
            .:.|:
Yeast   469 KLFHE 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbceNP_610197.2 CAP_GLY 14..79 CDD:214997 26/69 (38%)
LRR_RI <148..268 CDD:330982 32/130 (25%)
leucine-rich repeat 158..183 CDD:275380 5/24 (21%)
leucine-rich repeat 184..211 CDD:275380 9/26 (35%)
leucine-rich repeat 212..238 CDD:275380 7/34 (21%)
leucine-rich repeat 239..262 CDD:275380 7/24 (29%)
leucine-rich repeat 263..287 CDD:275380 8/23 (35%)
leucine-rich repeat 288..317 CDD:275380 6/28 (21%)
leucine-rich repeat 318..343 CDD:275380 6/25 (24%)
PAC2NP_010922.1 CAP_GLY 5..72 CDD:214997 27/70 (39%)
leucine-rich repeat 154..179 CDD:275380 5/24 (21%)
LRR_RI <175..350 CDD:423007 54/205 (26%)
leucine-rich repeat 180..204 CDD:275380 9/26 (35%)
leucine-rich repeat 205..229 CDD:275380 6/23 (26%)
leucine-rich repeat 256..277 CDD:275380 8/23 (35%)
leucine-rich repeat 278..298 CDD:275380 6/28 (21%)
leucine-rich repeat 299..324 CDD:275380 6/25 (24%)
Ubiquitin_like_fold <445..502 CDD:421700 4/29 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346467
Domainoid 1 1.000 60 1.000 Domainoid score I2577
eggNOG 1 0.900 - - E1_KOG3207
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I1504
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54570
OrthoFinder 1 1.000 - - FOG0004303
OrthoInspector 1 1.000 - - oto100138
orthoMCL 1 0.900 - - OOG6_102729
Panther 1 1.100 - - LDO PTHR15140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2217
SonicParanoid 1 1.000 - - X4087
TreeFam 1 0.960 - -
1413.790

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