DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbce and tbce

DIOPT Version :9

Sequence 1:NP_610197.2 Gene:Tbce / 35532 FlyBaseID:FBgn0033055 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001035078.2 Gene:tbce / 664760 ZFINID:ZDB-GENE-051030-120 Length:521 Species:Danio rerio


Alignment Length:539 Identity:175/539 - (32%)
Similarity:285/539 - (52%) Gaps:40/539 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IIDEVQLFYPLGTRIKIGDNYGTVRYVGEVSGHMGSWLGIEWDDGLRGKHNGIVDGKRYFQTQTP 68
            ::||.     :|.|:......|||||||.|....|.|||:|||...||||:|..||.|||..:.|
Zfish     2 MLDEA-----VGRRVCCDGERGTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRHP 61

  Fly    69 TGGSFIRPGKVGPCATLEDAARERYLNYDSSNVDESLIREAQASLQASLFEVVGMDKIARKQSKF 133
            |||||:||.|.........|.::||    ...::|....|.:.|.:..:  :||.:.:.:||| .
Zfish    62 TGGSFVRPQKASFGVDYVTALKQRY----EVEIEEVTAEEMKISSKTVV--MVGFENVKKKQS-V 119

  Fly   134 EQLEEVSVDQTPVNAAGYLKELTHLT----TLNVSHTLIWNWEIVASIAQQLPSLTNLNLSSNRL 194
            :.|.||.:.:..|:|.|...|:.:.|    :|::|..|:.:||::|:|.:||.||..|:||.|||
Zfish   120 KNLTEVGLRRCEVSAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQELHLSHNRL 184

  Fly   195 VLPTSSQITELEPSFRQLKRINLRSCGFSDWKDVMHTALLWPNILSLGLQENSLGQLAEVDRTKI 259
            .:  ||..:.|..:|..|:.:::.||..: |..|:|.|.:|..:..|.|.:|::.:|...:.  :
Zfish   185 SI--SSAPSSLSSAFSHLRVLSINSCALT-WTQVLHCAPMWQQVEELYLADNNITELLRPEH--V 244

  Fly   260 FKQLHELDLHRTNIMDFDQVTKLGNLTTLRLLNIMENGIEEIKLPDCDSQEKLNIFVSLEQLNLL 324
            .:.|..|||....|.. :.|.::.:|..|..||:....:.|||..|..:.:|..:|.:|::|.|.
Zfish   245 LQALTVLDLSNNQIAQ-ETVLEISHLPRLERLNLSSTSLSEIKFSDVPAGKKTTLFPALKELLLD 308

  Fly   325 HNPIWNEADAFNELDKLPQLKRLS--KTP--HLKSNFDEMFSKAVASIASLQFINKAEVTAEQRR 385
            .|.| :|....|||:|||.|..||  :.|  |.:.|.:......:|.:..|:.::..::.:::||
Zfish   309 DNNI-SEWRVVNELEKLPSLVYLSCRRNPLLHKEKNLETARQIMIARLGQLELLDMRQILSDERR 372

  Fly   386 GAEYDIWKKYALDWMQATQGG------TDSLREFCRRHRTYPLLVKKYGSPADFVPRSQ---AKQ 441
            |||.|..|.:...|::|  ||      .:...:|...|..|..|::|||:|.:...|.|   |.:
Zfish   373 GAELDYCKMFGSAWLRA--GGHREAEKNNPNTDFMTEHPRYLTLIQKYGAPDEGELREQKPFALK 435

  Fly   442 SNLINVSI--RHQLTGETWEKKVPRMITVQTLQGLVMKRFRLSGDVPQLCYVDALHPDLVVPLDN 504
            :.|:.::.  ...|..:..|||:|..:.||.::||:.:..:|.|...:|.|..|...|..:.:||
Zfish   436 NQLLTITFLCPEDLERKPIEKKLPGSMIVQKVKGLLHRLLKLPGVELKLTYTCAKMADREIEIDN 500

  Fly   505 NAKTLDFYSVQEHDTVLVQ 523
            :.|.|.||||::.|.:||:
Zfish   501 DLKPLQFYSVEDGDKILVR 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbceNP_610197.2 CAP_GLY 14..79 CDD:214997 35/64 (55%)
LRR_RI <148..268 CDD:330982 39/123 (32%)
leucine-rich repeat 158..183 CDD:275380 10/28 (36%)
leucine-rich repeat 184..211 CDD:275380 11/26 (42%)
leucine-rich repeat 212..238 CDD:275380 8/25 (32%)
leucine-rich repeat 239..262 CDD:275380 4/22 (18%)
leucine-rich repeat 263..287 CDD:275380 7/23 (30%)
leucine-rich repeat 288..317 CDD:275380 9/28 (32%)
leucine-rich repeat 318..343 CDD:275380 11/24 (46%)
tbceNP_001035078.2 CAP_GLY 7..71 CDD:214997 35/63 (56%)
leucine-rich repeat 122..144 CDD:275380 7/21 (33%)
LRR_RI <144..338 CDD:238064 66/200 (33%)
LRR 1 147..168 6/20 (30%)
leucine-rich repeat 148..173 CDD:275380 9/24 (38%)
LRR 2 173..194 10/22 (45%)
leucine-rich repeat 174..199 CDD:275380 11/26 (42%)
LRR 3 199..220 6/21 (29%)
leucine-rich repeat 200..224 CDD:275380 8/24 (33%)
LRR_8 224..282 CDD:290566 14/60 (23%)
LRR 4 224..245 4/22 (18%)
leucine-rich repeat 225..247 CDD:275380 4/23 (17%)
LRR 5 247..268 6/21 (29%)
leucine-rich repeat 248..271 CDD:275380 7/23 (30%)
LRR 6 271..292 7/20 (35%)
leucine-rich repeat 272..301 CDD:275380 9/28 (32%)
LRR 7 301..322 8/21 (38%)
leucine-rich repeat 302..326 CDD:275380 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595830
Domainoid 1 1.000 76 1.000 Domainoid score I8969
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37744
Inparanoid 1 1.050 251 1.000 Inparanoid score I3216
OMA 1 1.010 - - QHG54570
OrthoDB 1 1.010 - - D198966at33208
OrthoFinder 1 1.000 - - FOG0004303
OrthoInspector 1 1.000 - - oto39682
orthoMCL 1 0.900 - - OOG6_102729
Panther 1 1.100 - - LDO PTHR15140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2217
SonicParanoid 1 1.000 - - X4087
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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