DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbce and Tbcel

DIOPT Version :10

Sequence 1:NP_610197.2 Gene:Tbce / 35532 FlyBaseID:FBgn0033055 Length:523 Species:Drosophila melanogaster
Sequence 2:XP_038937343.1 Gene:Tbcel / 315591 RGDID:1308880 Length:485 Species:Rattus norvegicus


Alignment Length:436 Identity:104/436 - (23%)
Similarity:174/436 - (39%) Gaps:90/436 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 VNAAGYLKEL----THLTTLNVSHTLIWNWEIVASIAQQLPSLTNLNLSSNRLVLPTSSQITE-- 204
            :..||..:|:    .|::.|::|...:.:|..|:.|...:|.|..||||||    |.|..:.|  
  Rat    78 ITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSN----PLSLSVLERT 138

  Fly   205 LEPSFRQLKRINLRSCGFSDWKDVMHTALL-WPNILSLGLQENSLGQLAEVDRTKI----FKQLH 264
            ...||..::::.|.:...| |:.| ||.|. .|::..|.|   .|.....|....:    .|.||
  Rat   139 CAGSFSGVRKLVLNNSKAS-WETV-HTILQELPDLEELFL---CLNDYETVSCPSVCCHSLKLLH 198

  Fly   265 ELDLHRTNIMDFDQVTKLG----NLTTLRLLNIMENGIEEIKLPDCDSQEKLNIFVSLEQLNLLH 325
            ..|   .|:.::.::.|||    :|.||.|.|...|.|||    ..||..:|  |.:|..::|..
  Rat   199 ITD---NNLQEWTEIRKLGVMFPSLDTLVLANNHVNAIEE----PADSLARL--FPNLRSISLHK 254

  Fly   326 NPI--WNEADAFNELDKLPQLKRLSKTPHLKS-NFDEMFSKAVASIASLQFINKAEVTAEQRRGA 387
            :.:  |.:.|..|...||.:: ||...|.|:. ..:|.....||.:.|:..:|.:.||..:|..:
  Rat   255 SGLQSWEDIDKLNSFPKLEEV-RLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVVTDGEREDS 318

  Fly   388 EYDIWKKYA-------------------LDWMQATQGGTDSLREFCRRHRT-----------YPL 422
            |....:.|.                   |......||.....:.:.:|..:           |..
  Rat   319 ERFFIRYYVDVPQEEVPFRIRAPRIIPLLQGQPGLQGVFQDSQAYIKRTLSQKEKRGRILWWYHE 383

  Fly   423 LVKKYG-----SPADFVPRSQAK-----QSNLINVSIRHQLTGETWEKKVPRMITVQTLQGLVMK 477
            |:.|||     :..|..|:|.||     ...:..||||...|....::::..::.:.|...|   
  Rat   384 LITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEEVSIRLDQTVAELKRQLKTLVQLPTSSML--- 445

  Fly   478 RFRLSGDVPQLCYVDALHPDLVVPLDNNAKTLDFYSVQEHDTVLVQ 523
                      |.|.|...|.....:..:::.|..:.:::.|.:.|:
  Rat   446 ----------LYYFDHEAPFGPEEMKYSSRALHSFGIRDGDKIFVE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbceNP_610197.2 CAP_GLY 14..79 CDD:214997
LRR <131..376 CDD:443914 70/247 (28%)
leucine-rich repeat 158..183 CDD:275380 5/24 (21%)
leucine-rich repeat 184..211 CDD:275380 12/28 (43%)
leucine-rich repeat 212..238 CDD:275380 8/26 (31%)
leucine-rich repeat 239..262 CDD:275380 4/26 (15%)
leucine-rich repeat 263..287 CDD:275380 8/27 (30%)
leucine-rich repeat 288..317 CDD:275380 11/28 (39%)
leucine-rich repeat 318..343 CDD:275380 7/26 (27%)
Ubl_TBCE 443..523 CDD:340564 13/79 (16%)
TbcelXP_038937343.1 leucine-rich repeat 70..90 CDD:275380 3/11 (27%)
LRR <91..>277 CDD:443914 59/204 (29%)
leucine-rich repeat 96..119 CDD:275380 5/22 (23%)
leucine-rich repeat 120..148 CDD:275380 12/31 (39%)
leucine-rich repeat 171..193 CDD:275380 4/24 (17%)
leucine-rich repeat 194..219 CDD:275380 8/27 (30%)
leucine-rich repeat 220..246 CDD:275380 13/31 (42%)
leucine-rich repeat 247..271 CDD:275380 5/23 (22%)
Ubl_TBCEL 398..483 CDD:340565 19/97 (20%)
Blue background indicates that the domain is not in the aligned region.

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