DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbce and tbcel

DIOPT Version :9

Sequence 1:NP_610197.2 Gene:Tbce / 35532 FlyBaseID:FBgn0033055 Length:523 Species:Drosophila melanogaster
Sequence 2:XP_031760631.1 Gene:tbcel / 100125781 XenbaseID:XB-GENE-854925 Length:438 Species:Xenopus tropicalis


Alignment Length:411 Identity:103/411 - (25%)
Similarity:175/411 - (42%) Gaps:83/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 VNAAGYLKEL----THLTTLNVSHTLIWNWEIVASIAQQLPSLTNLNLSSNRLVLPTSSQITELE 206
            :|.||...|:    :|::.|::|...:.:||.|:.|...:|.|..||||||.|.|....:  ...
 Frog    74 INCAGDESEIAAFCSHVSELDLSDNKLDDWEEVSKIVSSVPQLQFLNLSSNPLHLSVLGR--SCA 136

  Fly   207 PSFRQLKRINLRSCGFSDWKDVMHTALL-WPNILSLGLQENSLGQLAEVDRTKIFKQLHELDLHR 270
            .:|..::::.|.:|..| |:.| ||.|: .|.:..|.|..|....:  :.....|:.|..|.:..
 Frog   137 GTFSSIRKLVLNNCKAS-WETV-HTLLMELPELEELFLCLNDYNTV--LCSPVCFRSLKLLHITD 197

  Fly   271 TNIMDFDQVTKLGN----LTTLRLLNIMENGIEEIKLPDCDSQEKL-NIFVSLEQLNLLHNP--- 327
            .|:.|:..:.|||.    |.||.|.|   |.:.:|:    ||:|.| .:|.:|..:: ||..   
 Frog   198 NNLQDWSDIRKLGTMFPCLDTLVLAN---NNLSKIE----DSEESLARLFPNLRSIS-LHKAGLN 254

  Fly   328 IWNEADAFNELDKLPQLKRLSKTPHLKS-NFDEMFSKAVASIASLQFINKAEVTAEQRRGAEYDI 391
            .|.:.:..|.|.||.:: ||...|.::. :.:|.....:|.:.|:..:|.:.||..:|.      
 Frog   255 SWRDIEKLNALPKLEEV-RLLGIPLVEPYSTEERRKLVIARLPSVSKLNGSVVTDGERE------ 312

  Fly   392 WKKYALDWMQATQGGTDSLREFCRRHRTYPL---------LVKKYGS-----PADFVPRSQAK-- 440
                            ||.|.|.|.:...|.         ||.|||.     ..|..|:|:|.  
 Frog   313 ----------------DSERFFLRYYMNLPKEDVPLRYQELVTKYGKLEPLVEVDLRPQSKANVD 361

  Fly   441 ---QSNLINVSIRHQLTGETWEKKVPRMITVQTLQGLVMKRFRLSGDVPQLCYVDALHPDLVVPL 502
               :..:..:|||...|...::|::..::             :||.:..:|.|:|...|.....:
 Frog   362 IHFEEKVETISIRLDQTVAEFKKQLKNLV-------------QLSTNNMRLYYLDHEAPFGPEEM 413

  Fly   503 DNNAKTLDFYSVQEHDTVLVQ 523
            ..:.:.|..|:|.:.|...|:
 Frog   414 KFSTRFLHSYNVHDGDKFYVE 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbceNP_610197.2 CAP_GLY 14..79 CDD:214997
LRR_RI <148..268 CDD:330982 36/124 (29%)
leucine-rich repeat 158..183 CDD:275380 6/24 (25%)
leucine-rich repeat 184..211 CDD:275380 10/26 (38%)
leucine-rich repeat 212..238 CDD:275380 9/26 (35%)
leucine-rich repeat 239..262 CDD:275380 4/22 (18%)
leucine-rich repeat 263..287 CDD:275380 8/27 (30%)
leucine-rich repeat 288..317 CDD:275380 10/29 (34%)
leucine-rich repeat 318..343 CDD:275380 8/27 (30%)
tbcelXP_031760631.1 PPP1R42 <64..126 CDD:411060 19/51 (37%)
leucine-rich repeat 90..115 CDD:275380 6/24 (25%)
leucine-rich repeat 116..141 CDD:275380 10/26 (38%)
leucine-rich repeat 142..189 CDD:275380 13/50 (26%)
leucine-rich repeat 190..215 CDD:275380 7/24 (29%)
LRR_9 <202..318 CDD:405295 37/146 (25%)
leucine-rich repeat 216..242 CDD:275380 12/32 (38%)
Ubl_TBCEL 351..436 CDD:340565 20/97 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2217
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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