Sequence 1: | NP_788277.1 | Gene: | SCAP / 35529 | FlyBaseID: | FBgn0033052 | Length: | 1276 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498813.1 | Gene: | ncr-2 / 176165 | WormBaseID: | WBGene00003562 | Length: | 1274 | Species: | Caenorhabditis elegans |
Alignment Length: | 917 | Identity: | 156/917 - (17%) |
---|---|---|---|
Similarity: | 294/917 - (32%) | Gaps: | 325/917 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 90 YPLINIPLPGTIPTKIVVPYETGSGSLSWHSLNTSSTTPQEPHPSGEPWPPEPQVLNSSTTDRSP 154
Fly 155 PPLLPWAQSSPAFFYVQQITLRTSVLPWTEGMQLMDAFRAPL-HEVFKLLEIVRNHQSSENKRTL 218
Fly 219 EHNCLHVDNVKRGTHGQLDQIF-----PEYGCLLLSPANLWTQNSQNF------TRDTNILN--- 269
Fly 270 ------------TIFQYHNL------------------QKSKVSAAEMLFGLPMQDTGFKRYPLR 304
Fly 305 ARSRIIQYAL-----------TLFL--------KHNDMEYL--DTLKEKLLRHYPPLPLASASAE 348
Fly 349 EPTTITYIFYPGEYRMWEL----VPYTVAFMLVFAYVYFSVRKIDVFRSRFLLALCSVITTAGSL 409
Fly 410 AMSLGLCFFFGLTISLQSKDIFPYLVILVGLENSLVITKSVVSMDETF--------DVKIRVAQA 466
Fly 467 LSKE-GWHISKTLLTEITILTIG-----LATFVPVIQEFCIFAIVGLLSDFMLQMLLFSTILAMN 525
Fly 526 IKRTEYTAEAKHLPKMLLSCTQGAGRQDFRFFGAAPALPPFVPGTFQRSQSHPKLCFADPASVSD 590
Fly 591 RTSLVNGH-SSPEQRIPKRI------KIVNFWARTRFFQRAFMIWMIVWICSIVYNSGYLEQLFS 648
Fly 649 MQSNGTMTATLE-LQRRLQAG-------RGAVSSFFEGWQADGQRATSAPSGSGFSTPIKAPLA- 704
Fly 705 IDINETAEEMMRLRYPS--------FDLNYFLSNF-------------------------HWSTI 736
Fly 737 MKQYNISLS----------GHYVTLLPTIRLSH---AIAPELATLLRNPQEQ------------L 776
Fly 777 QQNFQ----W---KALAAALDPLDFNDDDVRRESPMVMAEGLPLVPKSPMEIFFAILLCCISIFV 834
Fly 835 LCYTMVV 841 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCAP | NP_788277.1 | Sterol-sensing | 390..542 | CDD:289145 | 22/165 (13%) |
WD40 | <878..1227 | CDD:225201 | |||
WD40 | 878..1185 | CDD:295369 | |||
WD40 repeat | 887..942 | CDD:293791 | |||
WD40 repeat | 945..983 | CDD:293791 | |||
WD40 repeat | 989..1070 | CDD:293791 | |||
WD40 repeat | 1079..1114 | CDD:293791 | |||
WD40 repeat | 1120..1157 | CDD:293791 | |||
WD40 repeat | 1162..1196 | CDD:293791 | |||
WD40 repeat | 1201..1233 | CDD:293791 | |||
ncr-2 | NP_498813.1 | NPC1_N | 29..242 | CDD:293023 | |
2A060601 | 85..1236 | CDD:273337 | 156/917 (17%) | ||
MMPL | 619..783 | CDD:304422 | 23/174 (13%) | ||
MMPL | <1107..1236 | CDD:304422 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1933 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |