Sequence 1: | NP_788277.1 | Gene: | SCAP / 35529 | FlyBaseID: | FBgn0033052 | Length: | 1276 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001120162.1 | Gene: | scap / 100145201 | XenbaseID: | XB-GENE-996521 | Length: | 1319 | Species: | Xenopus tropicalis |
Alignment Length: | 1447 | Identity: | 429/1447 - (29%) |
---|---|---|---|
Similarity: | 638/1447 - (44%) | Gaps: | 371/1447 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 VSHFYYKHGLFLSSYPTCASSIAFMAILLSCYPLINIPLPGTIPTKIVVPYETGSGSLSWHSLNT 123
Fly 124 SSTTPQEPHPSGEPWPPEPQVLNSSTTDRSPPPLLPWAQSSPAFFYVQQITLRTSVLPWTEGMQL 188
Fly 189 MDAFRAPLHEVFKLLEIVRNH--QSSENKRTLEHNCLHVDNVKRGTHGQLDQIFPEYGCLLLSPA 251
Fly 252 NLWTQNSQNFTRDTNILNTIFQYH--NLQKSKVSAAEMLFGLPMQDTGFKRYPLRARSRIIQYAL 314
Fly 315 TLFLKHNDMEYLDTLKEKLLRHYPPLPLASASAEEPTT-ITYIFYPGEYRMWELVPYTVAFMLVF 378
Fly 379 AYVYFSVRKIDVFRSRFLLALCSVITTAGSLAMSLGLCFFFGLTISLQSKDIFPYLVILVGLENS 443
Fly 444 LVITKSVVSMDETFDVKIRVAQALSKEGWHISKTLLTEITILTIGLATFVPVIQEFCIFAIVGLL 508
Fly 509 SDFMLQMLLFSTILAMNIKRTEYTAEAKHLPKMLLSCTQGAGRQDFRFFGAAPALPPFVPGTFQR 573
Fly 574 SQSHPKLCFADPASVSDRTSLVNGHSSPEQRIPKRIKIVNFWARTRFFQRAFMIWMIVWICSIVY 638
Fly 639 NS-----GYLEQLFSMQS--------------------NGTMTATLE------LQRRLQAGRGAV 672
Fly 673 SSFFEGWQADGQRAT---SAPSGSGFSTPI----KAPLAIDINETAEEMMRLRYPSFDLNYFLSN 730
Fly 731 FHWSTIMKQYNISLSGHYVTLLPTIRLSHAIAPELATLLRNPQEQLQQNFQWKALAAALDPLDFN 795
Fly 796 DDDVRRESPMVMAEGLP---------------LVPKSPMEIFF---AILLCCISIFVLCYTMVVF 842
Fly 843 YRCICTRNYAEWRSSWH----ESEAP---YKQTEQILEGVPTQIAGHKHRIECLVSDGAYIISCC 900
Fly 901 LKGQIRVWDARSGEQLTSISRSDI----------------------------------------- 924
Fly 925 ----------------------------------------------------------------- 924
Fly 925 ------------QISQQR--------TDGQTLVRKLAV----------------------SPVWC 947
Fly 948 LDYFDNLIAVGCANGRVELWESPAGLLKCAYQEDAKRNQGITHIHLNGDRVIVARLNGRLDFYRL 1012
Fly 1013 ETYYKGKQIDWGFTSAYRRTHVRTGSTGSLGLMLQQQRCQQEASQKTTKEEMKITLEGVRLAHQQ 1077
Fly 1078 PITCMQVVNDMVFTGSQDHTLKVYCLNKSDVEYTLHGHCGPVTCLFVDRWQPGTGGSGSQDGLLC 1142
Fly 1143 VWDLFTGACMYNIQAHDGAVSCLACAPSYVISLGTDERICVWERFQGNLLTTINIS-NAYSSLLM 1206
Fly 1207 LTPSLLVTSKMGSLIVWDVRTG--------------QPAREVKLDFANLQLCPKIMMLACDSVVC 1257
Fly 1258 DYGNEIRVVRFPIVADK 1274 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SCAP | NP_788277.1 | Sterol-sensing | 390..542 | CDD:289145 | 79/151 (52%) |
WD40 | <878..1227 | CDD:225201 | 133/497 (27%) | ||
WD40 | 878..1185 | CDD:295369 | 119/454 (26%) | ||
WD40 repeat | 887..942 | CDD:293791 | 30/180 (17%) | ||
WD40 repeat | 945..983 | CDD:293791 | 15/37 (41%) | ||
WD40 repeat | 989..1070 | CDD:293791 | 21/80 (26%) | ||
WD40 repeat | 1079..1114 | CDD:293791 | 14/34 (41%) | ||
WD40 repeat | 1120..1157 | CDD:293791 | 12/36 (33%) | ||
WD40 repeat | 1162..1196 | CDD:293791 | 14/33 (42%) | ||
WD40 repeat | 1201..1233 | CDD:293791 | 14/45 (31%) | ||
scap | NP_001120162.1 | 2A060601 | <11..>446 | CDD:273337 | 189/475 (40%) |
Sterol-sensing | 306..452 | CDD:372063 | 77/145 (53%) | ||
WD40 | 795..826 | CDD:197651 | 18/30 (60%) | ||
WD40 | <993..1195 | CDD:225201 | 73/225 (32%) | ||
WD40 repeat | 1050..1086 | CDD:293791 | 15/37 (41%) | ||
WD40 | 1118..>1275 | CDD:392136 | 60/158 (38%) | ||
WD40 repeat | 1123..1157 | CDD:293791 | 13/33 (39%) | ||
WD40 repeat | 1162..1197 | CDD:293791 | 12/36 (33%) | ||
WD40 repeat | 1204..1237 | CDD:293791 | 13/32 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 185 | 1.000 | Domainoid score | I3334 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H8160 | |
Inparanoid | 1 | 1.050 | 617 | 1.000 | Inparanoid score | I880 |
OMA | 1 | 1.010 | - | - | QHG48668 | |
OrthoDB | 1 | 1.010 | - | - | D242783at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006370 | |
OrthoInspector | 1 | 1.000 | - | - | oto102985 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46378 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3741 |
SonicParanoid | 1 | 1.000 | - | - | X6092 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.110 |