DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strica and caspbl

DIOPT Version :10

Sequence 1:NP_610193.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_073804105.1 Gene:caspbl / 566185 ZFINID:ZDB-GENE-090311-53 Length:430 Species:Danio rerio


Alignment Length:232 Identity:62/232 - (26%)
Similarity:102/232 - (43%) Gaps:38/232 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 FDNKNEFRKGSAQDVKVLRATFEQLKCKVEVITDATLVTIKKTVRMLQTK-DFEDKSALVLVILS 386
            |.||.:.|.|:.:|.:.:....:.|...|....:.|...|.:.|:....: :.:|..:..:||:|
Zfish   203 FANKQDDRAGAERDEENMEWLLKNLNFMVIKYRNLTGNEISRAVQDFSRRHEHQDADSTFVVIMS 267

  Fly   387 HGTR-----------HDQIAAKDDDYSLDDDVVFPILRN---RTLKDKPKLIFVQACKGDCQLGG 437
            ||.|           ::.:..::|.|.::|  .|..|.:   ..|.||||:|.:|||:|. ||||
Zfish   268 HGDRIQNKDAILGVNYNWLQNRNDVYFVED--TFSHLNSVNCPALIDKPKVILIQACRGG-QLGG 329

  Fly   438 FMTDAAQPNGSPNEILK-----CY-STYEGFVSFRTE-DGTPFIQTLCEALNRSGKTSDIDTIMM 495
            .......|. |.:.:.|     |: ||....|::|.| .|:.||..:.:....|...   |.||.
Zfish   330 VPVKDCVPE-SDSWVHKEKDFVCFMSTMPDVVAYRDEVKGSYFISYIVDVFCSSACK---DHIME 390

  Fly   496 NVRQVVKMQSKDRQ-------IPSV--TSTLTSKYVF 523
            ..|:|.....||.:       :|.:  ||.:...|:|
Zfish   391 LFRKVAARMEKDERFRRQAKLLPCIERTSLVKKFYLF 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_610193.1 CASc 311..523 CDD:444667 61/230 (27%)
caspblXP_073804105.1 None

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