DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strica and casp7

DIOPT Version :9

Sequence 1:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_031760941.1 Gene:casp7 / 549053 XenbaseID:XB-GENE-484041 Length:318 Species:Xenopus tropicalis


Alignment Length:321 Identity:90/321 - (28%)
Similarity:134/321 - (41%) Gaps:46/321 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSS--GGTKPKVTAVAQSQDAQGTISTS 297
            |.|.|..       |..|  |.:....|...||..|...|  |.||.|.|...: :..|.:.:..
 Frog     9 PVPQSDT-------KEEP--VPEEDEDTIDAKPDRSQRFSLFGSTKKKKTEDPE-KPPQASDNVR 63

  Fly   298 LGISKSSLTKNKLKPARVYIFNHERFDNKNEF--RKGSAQDVKVLRATFEQLKCKVEVITDATLV 360
            :.........|..|..|..|.|::.||:....  |.|:..|.:.|...|:.|...|.|..:.:..
 Frog    64 IVTPAFQYKMNYGKVGRCIIINNKNFDDITGMSPRNGTDIDARDLLRCFKGLGFDVTVFNNKSCT 128

  Fly   361 TIKKTVRMLQTKDFEDKSALVLVILSHGTRHDQIAAKDDDYSLDDDVVFPILRN---RTLKDKPK 422
            .::..:|.:..:|.:|.:....:.||||   ::......|.::...|:..:.|.   |:|..|||
 Frog   129 EMETLLRSVAEQDHKDSACFACIFLSHG---EEGLIYGTDGAMPIKVLTTLFRGDKCRSLVGKPK 190

  Fly   423 LIFVQACKGDCQL-GGFMTDAAQPNGS------PN-------EILKCYSTYEGFVSFRTED-GTP 472
            |.|:|||:| |:. .|..|||...|.|      |.       :.|..|||..|:.|:|... |:.
 Frog   191 LFFIQACRG-CEFDDGLETDAGPSNDSLETDANPRHKIPVEADFLYAYSTVPGYYSWRNPGRGSW 254

  Fly   473 FIQTLCEALNRSGKTSDIDTIMMNVRQVVKMQ----------SKDRQIPSVTSTLTSKYVF 523
            |:|.||..||..||..::..|:..|..:|..|          :|.:|||.|.|.||.:..|
 Frog   255 FVQALCNVLNEHGKELEVMQILTRVNYLVATQFESYCDDPQFNKKKQIPCVVSMLTKELYF 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_001260718.1 CASc 311..523 CDD:294037 71/241 (29%)
casp7XP_031760941.1 CASc 71..316 CDD:237997 73/249 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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