DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strica and casp9

DIOPT Version :10

Sequence 1:NP_610193.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001007405.2 Gene:casp9 / 492763 ZFINID:ZDB-GENE-030825-5 Length:436 Species:Danio rerio


Alignment Length:437 Identity:103/437 - (23%)
Similarity:157/437 - (35%) Gaps:112/437 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 QHLETHRVDL-KGSRPKATWASFAS----------------TANSSTSSYVSPYRQKPSMAITCT 210
            |.|:.||::| |...|:.......|                |........|.....:.|:|....
Zfish     7 QILQRHRLNLVKALNPEDVCDKLLSKGVFTQDMIDEIQSKATRRDQARQLVKDLETRGSLAFPAF 71

  Fly   211 SPNIK-TPKTTSSTSSSSASSITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATP-KPFISLGS 273
            ..::: |.....:....|...:..||..|...|.|       |..|.. |:.|..| ||.|:   
Zfish    72 LDSLRETGHNDLAELLQSGDGVHRPPVISVQPSPI-------PLPVQN-LNHTEKPDKPDIA--- 125

  Fly   274 SGGTKPKVTAVAQSQDAQGTISTSLGISK--SSLTKNKLKPAR------------------VYIF 318
                .|::..:...         ||.:.|  |..::..::|.|                  ..|.
Zfish   126 ----SPRLVPLRPE---------SLPVHKTYSPPSETVVRPTRPRRDSIQCYKMDASPCGVCLII 177

  Fly   319 NHERFDNKNEF--RKGSAQDVKVLRATFEQLKCKVEVITDATLVTIKKTVRMLQTKDFEDKSALV 381
            |:..|:..:|.  ||||..|...|...|:.|..:|.|..:.....|:..:..|..||.......|
Zfish   178 NNINFEKASELNDRKGSNIDCDKLEKRFKALNFEVTVKRNLKSKRIRHEMASLAKKDHSTYDCCV 242

  Fly   382 LVILSHGTRHDQIAAKDDDYSLDDDVV-FPILRN-------RTLKDKPKLIFVQACKG------- 431
            ::||||||...........:.:|...| ..|:.|       .:|:.||||.|:|||.|       
Zfish   243 VIILSHGTEASHNRFPGAVHGVDGPAVPIQIITNYLNGQNCPSLQGKPKLFFIQACGGGEKDIGF 307

  Fly   432 -----DCQ--LGGF---------------------MTDAAQPNGSPNEILKCYSTYEGFVSFR-T 467
                 |.|  :||.                     ..||.....:|::||..|||:.|:||:| |
Zfish   308 EVSPDDVQPSIGGIDDEMDAIPMSSSSDSLSTASDELDARASLPTPSDILVSYSTFPGYVSWRDT 372

  Fly   468 EDGTPFIQTLCEALNRSGKTSDIDTIMMNVRQVVKMQSKD---RQIP 511
            |.|:.:::.|...|..:..|.|:.|::|.|...|...|..   :|:|
Zfish   373 EAGSWYVENLDRVLEENAITDDLVTMLMLVNDAVSQISAKGLYKQMP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_610193.1 CASc 311..523 CDD:444667 71/268 (26%)
casp9NP_001007405.2 CARD_CASP9 5..88 CDD:176740 13/80 (16%)
CASc 163..432 CDD:237997 69/257 (27%)

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