DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strica and Drice

DIOPT Version :9

Sequence 1:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster


Alignment Length:340 Identity:100/340 - (29%)
Similarity:143/340 - (42%) Gaps:71/340 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 ITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSSG---GTKPKVTAVAQSQDAQG 292
            :.:|.:|:....::.|:...                   ..||||   |:.....:.|..|.|.|
  Fly    17 VGNPEQPNDHTDALGSVGSG-------------------GAGSSGLVAGSSHPYGSGAIGQLANG 62

  Fly   293 TISTSLGISKSSLTKNKLK-----PARVY-----------IFNHERFDNKN-EFRKGSAQDVKVL 340
            ..|.|     ||..||..|     .|..|           |||||.|:... :.|.|:..|.:.|
  Fly    63 YSSPS-----SSYRKNVAKMVTDRHAAEYNMRHKNRGMALIFNHEHFEVPTLKSRAGTNVDCENL 122

  Fly   341 RATFEQLKCKVEVITDATLVTIKKTVRMLQTKDFEDKSALVLVILSHGTRHDQIAAKDDDYSLDD 405
            ....:||..:|.|..|.....|.:|:....:::..|...:::.||||| ....|.|||..|.||:
  Fly   123 TRVLKQLDFEVTVYKDCRYKDILRTIEYAASQNHSDSDCILVAILSHG-EMGYIYAKDTQYKLDN 186

  Fly   406 DVVFPILRNR--TLKDKPKLIFVQACKGDCQLGGFMTDAAQ--PNGSPN---------EILKCYS 457
            ...| ...|.  :|..||||.|:|||:||...||.....:|  .:|..:         :.|..||
  Fly   187 IWSF-FTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYS 250

  Fly   458 TYEGFVSFR-TEDGTPFIQTLCEALNRSGKTSDIDTIMMNV--RQVVKMQS---------KDRQI 510
            |..||.|:| |..|:.|:|:||..|..:||..||.|::..|  |..|..:|         :.:||
  Fly   251 TVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQI 315

  Fly   511 PSVTSTLTSKYVFGD 525
            |.:|:.||....|.|
  Fly   316 PCITTMLTRILRFSD 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_001260718.1 CASc 311..523 CDD:294037 80/253 (32%)
DriceNP_524551.2 CASc 86..330 CDD:214521 79/245 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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