DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Strica and Dronc

DIOPT Version :9

Sequence 1:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_524017.1 Gene:Dronc / 39173 FlyBaseID:FBgn0026404 Length:450 Species:Drosophila melanogaster


Alignment Length:315 Identity:66/315 - (20%)
Similarity:124/315 - (39%) Gaps:59/315 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 TSSSSASSITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSSGGTKPKVTAVAQS 287
            ||..||..:.:|...:|....:|       |..::||.:..   |::  |...|.:     |.:|
  Fly   126 TSRKSADIVDTPSPEASEGPCVS-------KLRNEPLGALT---PYV--GVVDGPE-----VKKS 173

  Fly   288 QDAQGTISTSLGISKSSLTKNKLKPARVYIFNHERFDNKNEFRKGSAQDVKVLRATFEQLKCKVE 352
            :...|..|..||..|   .:::.....:.:.|...:.::|..|.|:.:|.|.|...|::|...:.
  Fly   174 KKIHGGDSAILGTYK---MQSRFNRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFTIF 235

  Fly   353 VITDATLVTIKKTVRMLQTKDF-EDKSALVLVILSHGTRHDQIAAKDDDYSLDDDVV-------- 408
            ...:.......|.:.|:.:..: ::....|:|:::||   :.:..|:.....|..||        
  Fly   236 PYGNVNQDQFFKLLTMVTSSSYVQNTECFVMVLMTHG---NSVEGKEKVEFCDGSVVDMQKIKDH 297

  Fly   409 FPILRNRTLKDKPKLIFVQACKGD-------CQLGGFMTDA----------AQPNGSPN------ 450
            |...:...|.:|||::....|:||       ...|..|...          .|..|.|:      
  Fly   298 FQTAKCPYLVNKPKVLMFPFCRGDEYDLGHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVP 362

  Fly   451 ---EILKCYSTYEGFVSFRTED-GTPFIQTLCEALNRSGKTSDIDTIMMNVRQVV 501
               :.|.||:...|:|:.|..| |:.:||..|:.:......:|::.|:....:.|
  Fly   363 SLADTLVCYANTPGYVTHRDLDTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAV 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_001260718.1 CASc 311..523 CDD:294037 46/227 (20%)
DroncNP_524017.1 CARD 18..106 CDD:260018
CASc 186..443 CDD:237997 47/238 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.