DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strica and Casp7

DIOPT Version :9

Sequence 1:NP_001260718.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_006526679.3 Gene:Casp7 / 12369 MGIID:109383 Length:350 Species:Mus musculus


Alignment Length:331 Identity:91/331 - (27%)
Similarity:134/331 - (40%) Gaps:77/331 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 SSSASSITSPPKPSSSVSSISSIFKSAPKQVDKPLSSTATPKPFISLGSSGGTKPKVTAVAQSQD 289
            |||...:.:.|..||.:|||         .:.|..:::|.|   :..|     :.:|.......|
Mouse    63 SSSEDGVDAKPDRSSIISSI---------LLKKKRNASAGP---VRTG-----RDRVPTYLYRMD 110

  Fly   290 AQGTISTSLGISKSSLTKNKLKPARVYIFNHERFDNKN--EFRKGSAQDVKVLRATFEQLKCKVE 352
            .|                   |..:..|.|::.||...  :.|.|:.:|...|...|:.|..:|.
Mouse   111 FQ-------------------KMGKCIIINNKNFDKATGMDVRNGTDKDAGALFKCFQNLGFEVT 156

  Fly   353 VITDATLVTIKKTVRMLQTKDFEDKSALVLVILSHGTRHDQIAAKDDDYSLDDDVVFPIL----- 412
            |..|.:...::..:|....:|..:.:....|:||||         ::|.....|.|.||.     
Mouse   157 VHNDCSCAKMQDLLRKASEEDHSNSACFACVLLSHG---------EEDLIYGKDGVTPIKDLTAH 212

  Fly   413 ----RNRTLKDKPKLIFVQACKGDCQLGGFMTDA-------AQP-NGSPNE--ILKCYSTYEGFV 463
                |.:||.:||||.|:|||:|.....|...|:       |.| |..|.|  .|..|||..|:.
Mouse   213 FRGDRCKTLLEKPKLFFIQACRGTELDDGIQADSGPINDIDANPRNKIPVEADFLFAYSTVPGYY 277

  Fly   464 SFRTE-DGTPFIQTLCEALNRSGKTSDIDTIMMNVRQVV----KMQSKD------RQIPSVTSTL 517
            |:|.. .|:.|:|.||..||..||..:|..|:..|...|    :.||.|      :|||.:.|.|
Mouse   278 SWRNPGKGSWFVQALCSILNEHGKDLEIMQILTRVNDRVARHFESQSDDPRFNEKKQIPCMVSML 342

  Fly   518 TSKYVF 523
            |.:..|
Mouse   343 TKELYF 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_001260718.1 CASc 311..523 CDD:294037 74/243 (30%)
Casp7XP_006526679.3 CASc 107..348 CDD:237997 76/268 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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