Protein Alignment Strica and Casp4

DIOPT Version :9

• Sequence 1: NP_001260718.1
• Gene: Strica / 35528
• FlyBaseID: FBgn0033051
• Length: 527
• Species: Drosophila melanogaster
• Sequence 2: NP_446188.2
• Gene: Casp4 / 114555
• RGDID: 621757
• Length: 373
• Species: Rattus norvegicus
• Alignment Length: 330
• Identity: 71/330 - (21%)
• Similarity: 127/330 - (38%)
• Gaps: 74/330 - (22%)

  Fly   247 IFKSAPKQVDKPLSSTATPKPFISL--GSSGGTKPKVTAVAQSQDAQGTISTSLGISKSSLT--- 306
            :.|....||.|.|..|     |:::  ||..|     .|..:.::.:.::.|....|....|
  Rat    60 VLKRKHNQVGKMLLQT-----FLNVDSGSHHG-----EANLEMEEPEESVDTLKLCSSEEFTRLC 114

  Fly   307 ---KNKLKPAR---------VYIFNHERFDNKNEFRKGSAQDVKVLRATFEQLKCKVEVITDATL 359
               |.::.|.:         :.|.|.| |.:.: .|.|:..|:..::...|:|...|.|..:.|.
  Rat   115 REKKQEIYPIKETNGRTRKALIICNTE-FKHLS-LRYGANIDISGMKGLLEELGYDVVVKEELTA 177

  Fly   360 VTIKKTVRMLQTKDF------EDKSALVLVILSHGTRHDQIAAKDDDYSLD---DDVVFPILRN- 414
            ..::.     :.|||      :...:..||::||||..........:.:.|   .|.::.|..|
  Rat   178 EGMES-----EMKDFAALSEHQTSDSTFLVLMSHGTLQGLCGTMHSEATPDVLLYDTIYQIFNNC 237

  Fly   415 --RTLKDKPKLIFVQACKGDCQLG-----------------------GFMTDAAQPNGSPNEILK 454
              ..|:||||:|.||||:|    |                       ....||.:.:....:.:.
  Rat   238 HCPGLRDKPKVIIVQACRG----GNPGEVWIRESSGAHSYRAVDLPRNMEADAVRMSHVEKDFIA 298

  Fly   455 CYSTYEGFVSFRTED-GTPFIQTLCEALNRSGKTSDIDTIMMNVRQVVKMQSKDRQIPSVTSTLT 518
            .|||....:|:|.:. |:.||..|.........:..:..|.:.|:|..:..|.:.|:|::.....
  Rat   299 LYSTTPHHLSYRDKTRGSYFISKLISCFRIHACSCHLFDIFLKVQQSFEKASINSQMPTIDRATL 363

  Fly   519 SKYVF 523
            ::|.:
  Rat   364 TRYFY 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Strica	NP_001260718.1	CASc	311..523	CDD:294037	56/256 (22%)
Casp4	NP_446188.2	CARD_CASP1-like	5..85	CDD:260036	9/29 (31%)
		CASc	122..371	CDD:214521	56/258 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3573
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810