DRSC/TRiP Functional Genomics Resources

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Protein Alignment Strica and CASP12

DIOPT Version :10

Sequence 1:NP_610193.1 Gene:Strica / 35528 FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001177945.2 Gene:CASP12 / 100506742 HGNCID:19004 Length:341 Species:Homo sapiens


Alignment Length:228 Identity:52/228 - (22%)
Similarity:97/228 - (42%) Gaps:39/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 RKGSAQDVKVLRATFEQLKCKVEVITDATLVTIKKTVRMLQT-KDFEDKSALVLVILSH------ 387
            |.||..|:..:|...|.|...|.:..:.|...::..:|.... .:.:...:..||.:||      
Human   114 RNGSELDLLGMRDLLENLGYSVVIKENLTAQEMETALRQFAAHPEHQSSDSTFLVFMSHSILNGI 178

  Fly   388 -GTRH-DQIAAKDDDYSLDDDVVFPILRNR---TLKDKPKLIFVQACKGD-CQLGGFMTDAAQPN 446
             ||:| ||    :.|. |.||.:|.|..||   :||||||:|.:|||:|: ..:..|.||:.:.:
Human   179 CGTKHWDQ----EPDV-LHDDTIFEIFNNRNCQSLKDKPKVIIMQACRGNGAGIVWFTTDSGKAS 238

  Fly   447 GSP----------NEILKCYSTYEGFVSFRTE-----------DGTPFIQTLCEALNRSGKTSDI 490
            ...          |:.:......:.|::|::.           :|:.||..:.........:..:
Human   239 ADTHGRLLQGNICNDAVTKAHVEKDFIAFKSSTPHNVSWRHETNGSVFISQIIYYFREYSWSHHL 303

  Fly   491 DTIMMNVRQVVKMQSKDRQIPSVTSTLTSKYVF 523
            :.|...|:...:..:...|:|::.....::|.:
Human   304 EEIFQKVQHSFETPNILTQLPTIERLSMTRYFY 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StricaNP_610193.1 CASc 311..523 CDD:444667 52/226 (23%)
CASP12NP_001177945.2 CARD_CASP1-like 6..88 CDD:260036
CASc 103..339 CDD:214521 52/228 (23%)
Blue background indicates that the domain is not in the aligned region.

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