DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pngl and PNG1

DIOPT Version :9

Sequence 1:NP_610192.1 Gene:Pngl / 35527 FlyBaseID:FBgn0033050 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_015229.1 Gene:PNG1 / 856009 SGDID:S000006017 Length:363 Species:Saccharomyces cerevisiae


Alignment Length:345 Identity:103/345 - (29%)
Similarity:149/345 - (43%) Gaps:60/345 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 IAFPRVLRTNNNFLQSLELYSDAVMQYEDNLLLATGRTLIPVEELTEMASEKLI--DIQDQIASG 212
            |.|..::.| |.|.|.:...|..:....||   .:..:::     .|.....||  ::..:.|..
Yeast    40 IRFQNLVHT-NQFAQGVLGQSQHLCTVYDN---PSWHSIV-----LETLDLDLIYKNVDKEFAKD 95

  Fly   213 ERQEKEPCVRDLLLVELVNWFNTQFFQWVNNIPCRVCG----------------SEESRLRRTER 261
            ...|.|....|.|:.||:.:|...||:|.|...|..||                .|||:....  
Yeast    96 GHAEGENIYTDYLVKELLRYFKQDFFKWCNKPDCNHCGQNTSENMTPLGSQGPNGEESKFNCG-- 158

  Fly   262 EGDIRVEVTVC--CGQESKFYRYNDISQLLVSRKGRCGEYANCFTFLCRALDYDARIVHSHFDHV 324
                .||:..|  ||..::|.||||..:||.:|||||||:.|.||.:.::...|.|.|.:..|||
Yeast   159 ----TVEIYKCNRCGNITRFPRYNDPIKLLETRKGRCGEWCNLFTLILKSFGLDVRYVWNREDHV 219

  Fly   325 WTEVYSEAQMRWLHVDPSENVIDSPLMYQHGWKRHIDYILAYSRDDIQDVTWRY------TNDHQ 383
            |.|.:|....||:|||..|...|.|.:|...|.:.:.|.:|:.:|.:.||:.||      ..|..
Yeast   220 WCEYFSNFLNRWVHVDSCEQSFDQPYIYSINWNKKMSYCIAFGKDGVVDVSKRYILQNELPRDQI 284

  Fly   384 KILHLRKLCGEKEMVQTLDAIRAKRRQNCTADRKLFLSQRNMYEVI----GLTLERK------PT 438
            |...|:.||         ..|..:.|.:...|....|:.|:..|.|    |.|.|.|      .:
Yeast   285 KEEDLKFLC---------QFITKRLRYSLNDDEIYQLACRDEQEQIELIRGKTQETKSESVSAAS 340

  Fly   439 ENELKGRSSGSLSWRQSRGE 458
            ::..:||.|||..|:..|||
Yeast   341 KSSNRGRESGSADWKAQRGE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PnglNP_610192.1 PUB 30..107 CDD:286494
CitX 98..>185 CDD:294885 9/34 (26%)
Transglut_core <278..341 CDD:280085 30/62 (48%)
YebA <282..378 CDD:224224 39/95 (41%)
Rad4 <325..>383 CDD:281786 21/63 (33%)
PAW 444..630 CDD:282564 9/15 (60%)
PNG1NP_015229.1 TGc 183..237 CDD:214673 26/53 (49%)
sm_acid_XPC-like <220..>274 CDD:415878 19/53 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342213
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10117
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S984
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004891
OrthoInspector 1 1.000 - - oto99861
orthoMCL 1 0.900 - - OOG6_103952
Panther 1 1.100 - - LDO PTHR12143
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R941
SonicParanoid 1 1.000 - - X3448
TreeFam 00.000 Not matched by this tool.
1110.820

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