DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pngl and Y50D4B.4

DIOPT Version :9

Sequence 1:NP_610192.1 Gene:Pngl / 35527 FlyBaseID:FBgn0033050 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_001300267.1 Gene:Y50D4B.4 / 3565176 WormBaseID:WBGene00021743 Length:791 Species:Caenorhabditis elegans


Alignment Length:746 Identity:150/746 - (20%)
Similarity:239/746 - (32%) Gaps:265/746 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VHQIEP-------------------KT---RSAG--QQQQERGLKEAYLEAVRILLVLLENILAQ 49
            :|:|:|                   ||   |..|  |...|.|..||.||.       .||.|..
 Worm   131 LHKIKPDEEGMIYWKFNLKATDKVVKTLVIRMIGINQTLNEGGKAEACLET-------FENCLEA 188

  Fly    50 PEN-----------SMFRTIR-QENKAIKEKLLSLPGCERLLEAIGFVRAPSSNAYTLPTEVSLQ 102
            |.|           ::|..:: .:|..:........|||.|  ..||    |..||.:.|:..|.
 Worm   189 PANQDLTIDMPRADTLFLGVKLYKNIKVFRYAEECMGCEEL--ESGF----SVKAYWVSTQDHLL 247

  Fly   103 QVKK-YRD------ALSERRTA--------WLNGTVSKSPPQQSTTSTTPLF----IKPSVEYRH 148
            .:.. :.|      |||.:...        :||.:.|.:.|..|...   ||    ::...:|..
 Worm   248 NISSTFHDDSGRVFALSPKTGENYAKFTYNFLNNSYSHNEPDGSPVR---LFDFNGLERVEDYTE 309

  Fly   149 RIAFPRVLRTNN-----NFLQSLELYSDAVMQYEDNLLLATGRTLIPVEELTEMASEKLIDIQDQ 208
            ...|   ||..|     |...:|:|..|.:.                    .|....|:|.| |:
 Worm   310 NTVF---LRRKNPKEKGNIKWALDLNIDGLS--------------------VETVVIKIIGI-DE 350

  Fly   209 IASGERQEKEPCVRDLLLVELVN-------------WFNTQFFQWVNNIPCRVCGSEESRLRRT- 259
            |.:| ......|..|  |..:||             :||..|.:...||..    .|:.::.:| 
 Worm   351 IDNG-GGTAIACGHD--LTSIVNPRCGNIPFNGKITFFNNAFHRLYLNITL----DEDIQIFKTK 408

  Fly   260 -EREG---DIRVEVTVCCGQESKFYRY-----NDISQLLVSRKGRCGEYANCFTFLCRALDYDAR 315
             :.||   ::.|||.....::...:.:     |:..||....|.|..|:.               
 Worm   409 LDDEGSLENVSVEVYWSDWRDDVPFHWTLKTQNESIQLGNRFKNRYFEFK--------------- 458

  Fly   316 IVHSHFDHVWTEVYSEAQMRWLHVDPSENVIDSPLMYQHGWKRHID------YILAYSRDDIQDV 374
                         |...:.::.|.:..|:.: .|.:.:: .:||.|      |:.....|:...:
 Worm   459 -------------YEIERGKYSHTNEDESAV-KPFLVKN-IERHADDDTYDVYLQKIKPDEEGMI 508

  Fly   375 TWRY----TNDHQKILHLRKLCGEKEMVQTLDA-----IRAKRRQNCT--------------ADR 416
            .|::    |:...|.|.:|.:    .:.|||:.     ...:..:|||              || 
 Worm   509 YWKFDLKATDKVVKTLVIRMI----GINQTLNGGGKAEACLETFENCTEIPVDEDLIIDMPRAD- 568

  Fly   417 KLFLSQRNMYEVIGLTLERKPTENELKGRSSGSLSWRQSRGEHTFTNIFVFNLSAT--------- 472
            .|||..: :|:  .:.:.||.   |...|.||.||....:.....|...:.|:|:|         
 Worm   569 TLFLGVK-LYK--NIKIFRKA---ERCVRCSGLLSGFSVKAYWVSTQDHLLNISSTFHDDSGRVF 627

  Fly   473 ----ELQKRQLNVRYSCATDTYERYAKEGEHITILDSYKTWQKAQFSSKNIFRKVER--DW--KM 529
                :..:......|:...:.|.....:|..:.:.|               |..:||  |:  ..
 Worm   628 ALSPKTGENYAKFTYNFINNLYSHTEPDGSPVRLFD---------------FNGLERVEDYTENT 677

  Fly   530 AYLARLEDTDCGEIAWTFDFSKTNLKVKSYNLVFETKTFGDGKISVTVDATDGSASVENATGFKI 594
            .:|.|....:.|.|.|..     ||::             |||....|        |....|.:.
 Worm   678 VFLRRKNPKEKGNIRWAL-----NLRI-------------DGKYVEKV--------VIGIIGIEE 716

  Fly   595 VAKLTGGKGDVAWQHTQLFRQSLNSRDYPFD 625
            :|. .||.....|  ..|:    |..|.|.|
 Worm   717 IAN-RGGTARACW--NVLY----NCIDIPID 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PnglNP_610192.1 PUB 30..107 CDD:286494 22/89 (25%)
CitX 98..>185 CDD:294885 21/110 (19%)
Transglut_core <278..341 CDD:280085 8/67 (12%)
YebA <282..378 CDD:224224 16/106 (15%)
Rad4 <325..>383 CDD:281786 11/67 (16%)
PAW 444..630 CDD:282564 39/199 (20%)
Y50D4B.4NP_001300267.1 PAW 83..170 CDD:214745 8/38 (21%)
PAW 266..353 CDD:214745 22/113 (19%)
PAW 449..536 CDD:214745 19/120 (16%)
PAW 632..706 CDD:214745 18/106 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157792
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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