DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pngl and png-1

DIOPT Version :9

Sequence 1:NP_610192.1 Gene:Pngl / 35527 FlyBaseID:FBgn0033050 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_492913.1 Gene:png-1 / 173028 WormBaseID:WBGene00010160 Length:606 Species:Caenorhabditis elegans


Alignment Length:591 Identity:167/591 - (28%)
Similarity:256/591 - (43%) Gaps:113/591 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 NAYTLPTEVSL---QQVKKYRDALSERRTAWLNGTVSKSPPQQSTTSTTPLFIKPSVEYRHRIAF 152
            |...:||.:.|   |||...|.|..:.....:....|.:|...:..|.                 
 Worm    72 NISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQHYSPTPANPNAASD----------------- 119

  Fly   153 PRVLRTNNNFLQSLELYSDAVMQYEDNLLLATGRTLIPVEELTEMASEKLIDIQDQIASGERQEK 217
                 :...||:.....|:....|:|.:..|..|:::| |||...|          :..|.|.||
 Worm   120 -----SEKRFLEQFVKCSNVPRSYQDEVFKALARSVMP-EELVGRA----------MTEGPRDEK 168

  Fly   218 EPCVRDLLLVELVNWFNTQFFQWVNNIPCRVC-------GSEESRLRRTEREGDI-RVEVTVC-- 272
                  .:|.:|::||.||||.|.:...|..|       |.:.:..|..::||.. ||||.:|  
 Worm   169 ------AILKDLLHWFKTQFFTWFDRPTCPKCTLKCSTDGLQGTPTREEQKEGGASRVEVYICDG 227

  Fly   273 CGQESKFYRYNDISQLLVSRKGRCGEYANCFTFLCRALDYDARIVHSHFDHVWTEVYSEAQMRWL 337
            |..|.:|.|||:.::||.:|.|||||:||||..|..||:.::|.::...||||.|||..|:.||.
 Worm   228 CNTEMRFPRYNNPAKLLQTRTGRCGEWANCFGLLLAALNLESRFIYDTTDHVWNEVYLLAEQRWC 292

  Fly   338 HVDPSENVIDSPLMYQHGWKRHIDYILAYSRDDIQDVTWRYTNDHQKILHLRKLCGEKEMVQTLD 402
            ||||.||.:|.||:|..||.:.:.|.:.|..|.:.||||||..|.:|::..|....:......|.
 Worm   293 HVDPCENTMDRPLLYTRGWGKTLGYCIGYGSDHVVDVTWRYIWDSKKLVTQRNEVRQPVFENFLS 357

  Fly   403 AIRAKRRQNCTADRKLFLSQRNMYEVIGLTLERKPTE--------NELKGRSSGSLSWRQSRGEH 459
            .:.:::.:..|..||..|:.|.:.|::.:..:.....        ::|.||.:||..||:.||| 
 Worm   358 KLNSRQAEGQTEPRKRELAVRRVCELMEMMAQEAKNHKIGWEKIGDDLGGRITGSEEWRRERGE- 421

  Fly   460 TFTNIFVFNLSATEL-------------QKRQLNVRYSCATDTYERYAKEGEHITILDSYKTWQK 511
                   ...|..:|             .:..|...|...||||.:..:.|           :..
 Worm   422 -------LGESGPKLLAEPIKLAPPTGPAQNYLEFNYDVITDTYSQPPEIG-----------FSA 468

  Fly   512 AQFSSKNIFRKVERDWKMAYLARLEDTDCGEIAWTFDFSKTNLKVKSYNL------VFE------ 564
            ..|..:|:.|..|.||.|.||.|......|.|:|.||.......::...:      .||      
 Worm   469 QAFELENVQRVEETDWNMTYLCRKRGDAPGNISWHFDLKSLKKSIEKIEIRMAGIQKFEKGKAMA 533

  Fly   565 TKTFGDGKISVTVDATDGSASVE---NATGFKIVAKLTGGKGDVAWQHTQLFRQSL----NSRDY 622
            ....||..:.:.:|.:  :.::|   ||...||.|.|:||:|.:.:|..|:||..|    .:|..
 Worm   534 IACLGDSCMRLPIDCS--ALTIEDPKNAEILKITATLSGGEGAIGFQQAQIFRTELKRGGGARTE 596

  Fly   623 PFDLQV 628
            .|.:::
 Worm   597 SFSVKI 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PnglNP_610192.1 PUB 30..107 CDD:286494 7/18 (39%)
CitX 98..>185 CDD:294885 15/89 (17%)
Transglut_core <278..341 CDD:280085 32/62 (52%)
YebA <282..378 CDD:224224 47/95 (49%)
Rad4 <325..>383 CDD:281786 29/57 (51%)
PAW 444..630 CDD:282564 55/217 (25%)
png-1NP_492913.1 TRX_family 20..103 CDD:239245 9/30 (30%)
Transglut_core 204..296 CDD:280085 42/91 (46%)
YebA <235..312 CDD:224224 40/76 (53%)
PAW 407..604 CDD:299187 55/217 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157786
Domainoid 1 1.000 81 1.000 Domainoid score I5492
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10117
Inparanoid 1 1.050 227 1.000 Inparanoid score I2223
Isobase 1 0.950 - 0 Normalized mean entropy S984
OMA 1 1.010 - - QHG49076
OrthoDB 1 1.010 - - D522988at33208
OrthoFinder 1 1.000 - - FOG0004891
OrthoInspector 1 1.000 - - oto19343
orthoMCL 1 0.900 - - OOG6_103952
Panther 1 1.100 - - LDO PTHR12143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3448
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.860

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