DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pngl and Pngl

DIOPT Version :10

Sequence 1:NP_610192.1 Gene:Pngl / 35527 FlyBaseID:FBgn0033050 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_061504268.1 Gene:Pngl / 1269792 VectorBaseID:AGAMI1_002532 Length:680 Species:Anopheles gambiae


Alignment Length:680 Identity:300/680 - (44%)
Similarity:404/680 - (59%) Gaps:87/680 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ERGLKEAYLEAVRILLVLLENILAQPENSMFRTIRQENKAIKEKLLSLPGCERLLEAIGFVRAPS 89
            |...||||:.|...||.||:||:.:|:|:.:||:|.:|.:|:|||||:.|.::|:.|||||.  |
Mosquito    13 ESNPKEAYVVAAETLLRLLDNIIREPQNAKYRTVRIDNPSIREKLLSVEGMKQLMLAIGFVE--S 75

  Fly    90 SNAYTLPTEVSLQQVKKYRDALSERRTAWLNGTVSKSPPQQ-----------------------S 131
            :...|:|:.|.|..|::||:.|.||:      .:.|:||::                       :
Mosquito    76 NGTLTVPSNVLLANVRRYREFLYERK------ELVKNPPKEKDITPIGSVTCTESNSSTASAAVT 134

  Fly   132 TTSTTPL-------------------------------FIKPSVEYRHRIAFPRVLRTNNNFLQS 165
            |||||.:                               .||.|..:..||.||:|:..||..|:.
Mosquito   135 TTSTTNIPQEAATEKSKMVLQPSGSNATAGQQRTEALCVIKSSRPFLARIEFPKVIPGNNTLLRQ 199

  Fly   166 LELYSDAVMQYEDNLLLATGRTLIPVEELTEMASEKLIDIQDQIASGER--QEKEPCVRDLLLVE 228
            |||.||.||||||.||||:|.:|||::.||..|..||...|..:|:.|.  |.|||..:||||.|
Mosquito   200 LELLSDQVMQYEDELLLASGTSLIPIDTLTAKAKSKLTQWQRLLATSEATDQSKEPSEKDLLLEE 264

  Fly   229 LVNWFNTQFFQWVNNIPCRVCGSEESRLRRTEREGDIRVEVTVCCGQESKFYRYNDISQLLVSRK 293
            |..||..:||.|||.:||.|||:|:::|.|:..|..:||||..||||...||||||:.:||.:|:
Mosquito   265 LTAWFRAEFFTWVNALPCTVCGNEKTQLVRSTVEDGVRVEVYQCCGQLRHFYRYNDVEKLLQTRR 329

  Fly   294 GRCGEYANCFTFLCRALDYDARIVHSHFDHVWTEVYSEAQMRWLHVDPSENVIDSPLMYQHGWKR 358
            |||||:|||||||||.|.||||.|.|..|||||||:||.:.||:||||.|||:|:||||:|||::
Mosquito   330 GRCGEWANCFTFLCRCLGYDARYVFSTGDHVWTEVWSERRQRWIHVDPCENVLDAPLMYEHGWRK 394

  Fly   359 HIDYILAYSRDDIQDVTWRYTNDHQKILHLRK---LCGEKEMVQTLDAIRAKRRQ--NCTADRKL 418
            .|.|:..::|||:||||||||||||::|..|:   .|.|..::..:..:|.|||.  |||.::..
Mosquito   395 EITYVFGFARDDVQDVTWRYTNDHQRLLQRRRQGGACSEHALLDAIAKLRTKRRAGLNCTPEQMS 459

  Fly   419 FLSQRNMYEVIGLTLE--RKPTENELKGRSSGSLSWRQSRGEHTFTNIFVFNLSATELQKRQLNV 481
            .|.:|.:.|.:.|...  |.||..|.:|||||||.||..|||......::|..:..|:|.:|.|:
Mosquito   460 LLRKRTIDECLELLANAGRVPTAAEREGRSSGSLEWRLQRGEQQTNTRYMFIPTEEEVQAKQFNI 524

  Fly   482 RYSCATDTYERYAK-----EGEHITILDSYKTWQKAQFSSKNIFRKVERDWKMAYLARLEDTDCG 541
            ||.||||.|||:.|     ..|.||  :....|:..|:.|:|||||.|.||||.||||.|..|..
Mosquito   525 RYCCATDCYERFLKGASNRVNERIT--EKSNGWESRQYVSRNIFRKEELDWKMVYLARTEGIDEA 587

  Fly   542 EIAWTFDFSKTNLKVKSYNLVFETKTFGDGKISVTVDATDGS-----ASVENATGFKIVAKLTGG 601
            .|.|.||||...|:||...|.|..:|:...|:.:....:|||     :|:.....|.:.|:|:||
Mosquito   588 TIEWNFDFSVQGLRVKQIELRFGQETYEGAKVELYYIKSDGSQSQALSSLCECGKFTLQARLSGG 652

  Fly   602 KGDVAWQHTQLFRQSLNSRD-YPFDLQVQL 630
            |   :|||.||||||..:.| |||::.:.|
Mosquito   653 K---SWQHAQLFRQSKTATDEYPFEMNIVL 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PnglNP_610192.1 PUB 29..109 CDD:462790 37/79 (47%)
Transglut_core <278..341 CDD:376628 43/62 (69%)
Rad4 <325..>383 CDD:427539 38/57 (67%)
PAW 444..630 CDD:461409 85/196 (43%)
PnglXP_061504268.1 None

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