DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and ARP4

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_564051.1 Gene:ARP4 / 838425 AraportID:AT1G18450 Length:441 Species:Arabidopsis thaliana


Alignment Length:441 Identity:171/441 - (38%)
Similarity:250/441 - (56%) Gaps:74/441 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV----------MVGMGQKDS----- 53
            :||:|:|||.||..||||:||:|||:|||||::|..  .||          ......:||     
plant     5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAV--DGVEAMDVDVDSTKTNSNSEDSKTESE 67

  Fly    54 --------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
                    |||.:|.| :|..:.:..||:.|||::||.::.||.|.|.:.|.:.|.|||:||.|.
plant    68 KEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEP 132

  Fly   110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 174
            |||.:..|||..::|||.:..||:::|...||:.:|:||.|.:|:|.|.|.:...|:::||.|..
plant   133 PLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQK 197

  Fly   175 AILRLDLAGRDLTDYLMKILTERG------YSF-------------------TTTA-----EREI 209
            |::...|.|..|||.|:|.|..:|      |||                   ||.:     :|.|
plant   198 AVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMI 262

  Fly   210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFL----GM 270
            |.|||:.:|.|.   :......:.|:....||||||||.:.||.:||:.|:.:|.||.:    ||
plant   263 VGDIKDSICRVP---DTPYDDKSYSNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGM 324

  Fly   271 E--------ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
            |        ..|:......||.|||||||::||::.:|:|||:....:.:|::|::...:|.:.:
plant   325 EKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSAR 389

  Fly   328 IKIVA---PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
            :|::|   ..||::||||||||||||.:|||||.||.||:|.|.|.:.|||
plant   390 VKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 171/441 (39%)
ARP4NP_564051.1 NBD_sugar-kinase_HSP70_actin 6..440 CDD:302596 169/438 (39%)
Actin 7..441 CDD:278451 170/439 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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