DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actl6b

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001412719.1 Gene:Actl6b / 83766 MGIID:1933548 Length:434 Species:Mus musculus


Alignment Length:436 Identity:157/436 - (36%)
Similarity:230/436 - (52%) Gaps:75/436 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS------------Y 54
            :||.|||.|.||...:||:||:|.|:|.||:.||  .....|.:...|:|:.            :
Mouse     9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALH 73

  Fly    55 V---GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
            |   |.|..|         |:::|::.:|:....|..||:...::..|..||||::|||.|.:|.
Mouse    74 VPRDGAEVMS---------PLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAK 129

  Fly   117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGYALPHAILRL 179
            |||:|::|||.:|.||.::...|||:.:|:||:||:||||  |.:||  :|:::||.|...|::.
Mouse   130 REKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDS--GATHTTAIPVHDGYVLQQGIVKS 192

  Fly   180 DLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKLCYVA------------L 222
            .|||..::....::..|......   ..|.:|.||:       .||||..|:            .
Mouse   193 PLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQ 257

  Fly   223 DFEQEMATAASSSSLEK--------SYELPDGQVITIGNERFRCPESLFQPS----FLGMEACGI 275
            ||:..:...:.|...|:        .||:|:|.....|.||.|.||.||.||    ..|....|:
Mouse   258 DFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGV 322

  Fly   276 HETTYNSIMKCDVDIR--------KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVA 332
            ......||..||:|||        :.||.:.:::||.|:..|..||:.:|::...|.:|::|::|
Mouse   323 GHVVTTSIGMCDIDIRPVDASPCSQGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIA 387

  Fly   333 ---PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
               ..|||:|.||||||||||.||||||||||||:|.|...|.|||
Mouse   388 SNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 151/427 (35%)
Actl6bNP_001412719.1 Essential for mediating its function in dendritic development, may contribute to neuronal-specific targeting. /evidence=ECO:0000269|PubMed:17920018 39..82 8/42 (19%)

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