DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act42A and ACT9

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_181739.1 Gene:ACT9 / 818809 AraportID:AT2G42090 Length:366 Species:Arabidopsis thaliana


Alignment Length:367 Identity:255/367 - (69%)
Similarity:303/367 - (82%) Gaps:5/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|.|.|.||.:||||||:||:.|||.:|||||.     |:...:||||:|..:.|.|||||.|:|
plant     4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTLKDPME 63

  Fly    74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
            ||||.||||||||||:||||||||.||||||||||||.|||||||||||||||:|:.|||||::|
plant    64 HGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQ 128

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            :||.||:||||||:|||.|:.||||||:||||||||.||||||.||||||||::|:|||||::||
plant   129 SVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTT 193

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFL 268
            :|||||||||||||||||||:||||.......:::|:|.|||||.|||..|||.|||.|||||.:
plant   194 SAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVI 258

  Fly   269 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAP 333
            |.|:.||||.|.|||:||.||.|:|:|.|.:::|||||..||.:||.||:.||.||:||:|:|.|
plant   259 GKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVP 323

  Fly   334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
            ||.:.|||||||||||||||.||||:|.||:|.|.:||||||
plant   324 PESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 249/361 (69%)
ACT9NP_181739.1 ASKHA_ATPase-like 3..361 CDD:483947 249/361 (69%)

Return to query results.
Submit another query.