DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actr3

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_112330.1 Gene:Actr3 / 81732 RGDID:71024 Length:418 Species:Rattus norvegicus


Alignment Length:416 Identity:151/416 - (36%)
Similarity:217/416 - (52%) Gaps:55/416 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.|||.|:|..|.|:||:..|:.:.||.        ||....:.||.|:...|.::||||..|..
  Rat     7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT 71

  Fly    65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            ..| |:||.||||.:||.||:......:..||..||:|..||||.|||...|||...:||||:||
  Rat    72 YAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFN 135

  Fly   130 TPAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 186
            .|.:|:|:||||:|.||       .|| ||.|:||||||:|.:|:.|||.:...|..:.:||||:
  Rat   136 VPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 200

  Fly   187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE-------------MATAASSSSLE 238
            |.::.::|.:|..........|..:.:||:..||..|..:|             ..|..::.| :
  Rat   201 TYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGVNAIS-K 264

  Fly   239 KSYELPDGQVITIGNERFRCPESLFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
            |.:.      |.:|.|||..||..|.|.|...: ...|.|.....|..|.:|:|:.||.|.||||
  Rat   265 KEFS------IDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSG 323

  Fly   303 GTTMYPGIADRMQKEIT----------------ALAPSTMKIKIVAPPERKYSVWIGGSILASLS 351
            |:||:.....|:|:::.                .|.|..:.::::....::|:||.|||:|||..
  Rat   324 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTP 388

  Fly   352 TFQQMWISKQEYDESGPSIV-HRKCF 376
            .|.|:..:|::|:|.||||. |...|
  Rat   389 EFYQVCHTKKDYEEIGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 150/414 (36%)
Actr3NP_112330.1 PTZ00280 2..417 CDD:240343 151/416 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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